; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G101480 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G101480
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description50S ribosomal protein L27-like
Genome locationchrH05:15582768..15583422
RNA-Seq ExpressionChy5G101480
SyntenyChy5G101480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001684 - Ribosomal protein L27
IPR018261 - Ribosomal protein L27, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139171.1 uncharacterized protein LOC101207653 [Cucumis sativus]5.73e-10397.97Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEGNVKFEK+KLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

XP_016901663.1 PREDICTED: 50S ribosomal protein L27-like [Cucumis melo]4.53e-10095.95Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPK+GHVLHPVY TTSTS QLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

XP_022964702.1 uncharacterized protein LOC111464705 [Cucurbita moschata]2.72e-9289.73Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT
        FALKEG VKFEKHKLSGRKWVH+IPKEGHVLHPVY TT  S +LKT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT

XP_022970580.1 uncharacterized protein LOC111469515 [Cucurbita maxima]1.15e-9389.86Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEG VKFEKHKLSGRKWVH+IPKEGHVLHPVY TT  S +LKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

XP_038877023.1 50S ribosomal protein L27-like [Benincasa hispida]6.67e-9389.8Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL T VPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERV PGNIIVRQRGTRFHPGDYVG+GKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTT
        FALKEG V FEKHKLSGRKWVHVIPKEGHVLHP+Y TTSTS +LKTT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTT

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ3 Uncharacterized protein3.1e-7897.97Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEGNVKFEK+KLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

A0A1S4E0A6 50S ribosomal protein L27-like5.0e-7695.95Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPK+GHVLHPVY TTSTS QLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

A0A5A7TXR2 50S ribosomal protein L27-like5.0e-7695.95Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPK+GHVLHPVY TTSTS QLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

A0A6J1HP14 uncharacterized protein LOC1114647055.3e-7089.73Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT
        FALKEG VKFEKHKLSGRKWVH+IPKEGHVLHPVY TT  S +LKT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKT

A0A6J1I390 uncharacterized protein LOC1114695153.7e-7189.86Show/hide
Query:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDL TNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA
        FALKEG VKFEKHKLSGRKWVH+IPKEGHVLHPVY TT  S +LKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA

SwissProt top hitse value%identityAlignment
A6UDV3 50S ribosomal protein L278.5e-2567.86Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK
        A KK  GS++NGRDS  K LGVKKFGGE VI GNIIVRQRGT++HPG  VG+GKDHT+FAL  GNV F K K +GR +V V+PK
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK

A9IM57 50S ribosomal protein L277.7e-2671.08Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP
        A KK  GS++NGRDS  K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFAL EG V F++ K   R +V VIP
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP

B4RZH4 50S ribosomal protein L278.5e-2567.07Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVI
        A KK  GSTKNGRDS  K LGVK+FGGE V+ GNIIVRQRGTRFH GD +GIGKDHTLFALK+G V+F+      RK+V ++
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVI

Q6G507 50S ribosomal protein L272.9e-2569.88Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP
        A KK  GS++NGRDS  K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFAL +G V F++ K + R +V VIP
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP

Q92LB7 50S ribosomal protein L271.1e-2467.86Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK
        A KK  GS++NGRDS  K LGVKKFGGE VIPGNIIVRQRGT++H G  VG+GKDHT+FAL  GNV F K K +GR +V V+PK
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK

Arabidopsis top hitse value%identityAlignment
AT2G16930.1 Ribosomal protein L27 family protein4.6e-5869.86Show/hide
Query:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y   + +   K
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK

AT2G16930.2 Ribosomal protein L27 family protein4.6e-5869.86Show/hide
Query:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y   + +   K
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK

AT2G16930.3 Ribosomal protein L27 family protein4.6e-5869.86Show/hide
Query:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y   + +   K
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLK

AT5G15220.1 Ribosomal protein L27 family protein3.2e-5970.2Show/hide
Query:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L T VP Y  SS SDG+++GL+L+F+RWATKKTAGSTKNGRDSNPK+LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLATNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVY--ETTSTSLQLKTTA
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y     + S +LKT +
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKEGHVLHPVY--ETTSTSLQLKTTA

AT5G40950.1 ribosomal protein large subunit 272.9e-2061.18Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPKE
        A KK AGSTKNGRDS  + LGVK +G +   PG IIVRQRGT+FH G  VGIGKDHT+F+L +G VKFEK     RK + V P+E
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAATATCGCTACCACGTTTTGCAAGCGACTGAATGTCAAGGATTTGGCGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTT
ATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCAACTAAAAATGGACGAGACTCGAATCCGAAGTATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTC
CTGGTAACATCATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTT
GAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCGAAGGAAGGGCACGTTCTTCATCCTGTTTATGAAACTACTTCTACTTCTCTACAATTGAAGACAAC
GGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAATATCGCTACCACGTTTTGCAAGCGACTGAATGTCAAGGATTTGGCGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTT
ATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCAACTAAAAATGGACGAGACTCGAATCCGAAGTATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTC
CTGGTAACATCATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTT
GAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCGAAGGAAGGGCACGTTCTTCATCCTGTTTATGAAACTACTTCTACTTCTCTACAATTGAAGACAAC
GGCATAA
Protein sequenceShow/hide protein sequence
MLNIATTFCKRLNVKDLATNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKF
EKHKLSGRKWVHVIPKEGHVLHPVYETTSTSLQLKTTA