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Chy5G105190 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G105190
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRING-box protein
Genome locationchrH05:18458369..18461229
RNA-Seq ExpressionChy5G105190
SyntenyChy5G105190
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141073.1 RING-box protein 1a [Cucumis sativus]5.75e-7399.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPAVEASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_008459863.1 PREDICTED: RING-box protein 1a-like isoform X1 [Cucumis melo]2.34e-7299.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMV AVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_015889019.1 RING-box protein 1a [Ziziphus jujuba]6.72e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVP  EASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_022933228.1 RING-box protein 1a [Cucurbita moschata]6.72e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_038889977.1 RING-box protein 1a-like isoform X1 [Benincasa hispida]4.73e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA +ASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

TrEMBL top hitse value%identityAlignment
A0A0A0LFP5 RING-type domain-containing protein2.4e-5599.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPAVEASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A1S3CBM5 RING-box protein 1a-like isoform X17.1e-5599.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMV AVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A6J1F460 RING-box protein 1a1.6e-5498.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A6J1I027 RING-box protein 1a1.6e-5498.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A6P4A6G4 RING-box protein 1a1.6e-5498.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVP  EASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX11.4e-4483.33Show/hide
Query:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
        M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Subjt:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL

P62878 E3 ubiquitin-protein ligase RBX11.4e-4483.33Show/hide
Query:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
        M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Subjt:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL

Q8QG64 RING-box protein 14.2e-4482.29Show/hide
Query:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
        M  A++  + +  +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Subjt:  MVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL

Q940X7 RING-box protein 1a2.1e-5191.51Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV M+PA EASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPL
        RQVCPL
Subjt:  RQVCPL

Q9M2B0 RING-box protein 1b8.4e-4581.9Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MA+L+SDV M     +S S   SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 115.1e-1340.24Show/hide
Query:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPL
        K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+
Subjt:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPL

AT3G42830.1 RING/U-box superfamily protein6.0e-4681.9Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MA+L+SDV M     +S S   SS+K  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

AT5G20570.1 RING-box 11.5e-5291.51Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV M+PA EASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPL
        RQVCPL
Subjt:  RQVCPL

AT5G20570.2 RING-box 11.7e-4874.62Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------
        MATLDSDV M+PA EASSS A  SS KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                  
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------

Query:  ------GVCNHAFHFHCISRWLKTRQVCPL
              GVCNHAFHFHCISRWLKTRQVCPL
Subjt:  ------GVCNHAFHFHCISRWLKTRQVCPL

AT5G20570.3 RING-box 12.2e-4877.42Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLDSDV M+PA EASSS A  SS KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSTKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GVCNHAFHFHCISRWLKTRQVCPL
        GVCNHAFHFHCISRWLKTRQVCPL
Subjt:  GVCNHAFHFHCISRWLKTRQVCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTACCAAGAAGCCCAAGCGTTTTGAGATCAAAAAGTGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCA
GCGAGGAATGTACTGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGTATTACAGTTGCAG
TCGCTAGACTCACCACAGGAAGAATCATTTTTGACCCCGCCACCACCGTCTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTACCAAGAAGCCCAAGCGTTTTGAGATCAAAAAGTGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCA
GCGAGGAATGTACTGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGTATTACAGTTGCAG
TCGCTAGACTCACCACAGGAAGAATCATTTTTGACCCCGCCACCACCGTCTTCCTGA
Protein sequenceShow/hide protein sequence
MATLDSDVPMVPAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLVLQLQ
SLDSPQEESFLTPPPPSS