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Chy6G108100 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G108100
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationchrH06:1889658..1890643
RNA-Seq ExpressionChy6G108100
SyntenyChy6G108100
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]6.73e-7198.35Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYSVPVAPGMTM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]2.31e-6795.93Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT T PDYS  VPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]7.14e-4777.87Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GTTT    +V  APG+T
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_023526293.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita pepo subsp. pepo]1.01e-4677.87Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+THTN FVAPG GTTT     V  APG+T
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]5.61e-5484.43Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLP-DYSVPVAPGMT
        MQAVK+KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA+THT+TFVAPGGT  L     + VAPG+T
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLP-DYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        +V APGTV+MAGAP PVNKKLL
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein7.4e-5498.35Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYSVPVAPGMTM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGTTTLPDYSVPVAPGMTM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYSVPVAPGMTM

Query:  VGAPGTVDMAGAPSPVNKKLL
        VGAPGTVDMAGAPSPVNKKLL
Subjt:  VGAPGTVDMAGAPSPVNKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833973.5e-5195.93Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT T PDYS  VPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A5A7U624 Late embryogenesis abundant protein3.5e-5195.93Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT T PDYS  VPVAPGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYS--VPVAPGM

Query:  TMVGAPGTVDMAGAPSPVNKKLL
        TMVGAPGTVDMAGAPSP NKKLL
Subjt:  TMVGAPGTVDMAGAPSPVNKKLL

A0A6J1ED39 late embryogenesis abundant protein 6-like2.0e-3577.87Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GTTT    +V  APG+T
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDMAG P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

A0A6J1IRE5 late embryogenesis abundant protein 6-like5.9e-3577.05Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GTTT    +V  APG+T
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTTTLPDYSVPVAPGMT

Query:  MVGAPGTVDMAGAPSPVNKKLL
        MVGAPGTVDM G P  V+KK L
Subjt:  MVGAPGTVDMAGAPSPVNKKLL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 65.6e-0646.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein4.0e-0746.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGTTAAGGAGAAGCTACACGATATGAGTGTCATGCGCAAAGCCAAGGCCGAGGCAAAGGCTGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGGCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTCGCTCCCGGCATGACTATGGTTGGAGCCCCCGGCACCGTCGACATGGCC
GGAGCTCCTTCTCCCGTTAATAAGAAGTTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCAGTTAAGGAGAAGCTACACGATATGAGTGTCATGCGCAAAGCCAAGGCCGAGGCAAAGGCTGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGGCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTCGCTCCCGGCATGACTATGGTTGGAGCCCCCGGCACCGTCGACATGGCC
GGAGCTCCTTCTCCCGTTAATAAGAAGTTACTGTAA
Protein sequenceShow/hide protein sequence
MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTTTLPDYSVPVAPGMTMVGAPGTVDMA
GAPSPVNKKLL