; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy6G112190 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G112190
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranscription termination factor MTEF1
Genome locationchrH06:4719663..4720777
RNA-Seq ExpressionChy6G112190
SyntenyChy6G112190
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049484.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]2.02e-16470.62Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MS LFR ILLLRSPS VFSHGFSE PLKSL +LSTSSE+VSS KSASL SNAV L NN K V  LLANHGFS+SQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIPAFDYIQA+LG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVPDSNIS+YLQ+QP+MF  SSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKE VERVTEMGFNP+RLQF+VAVFALRSMTKSTWD+KVEVYRKWG+SEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P LI+ SL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP
        KKRILPRGY+YQVL+SK LIK   +F+  F+ S N FI+KFINPHKEQIP LL LYK KLMDLEDEQVR P
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP

KAE8650380.1 hypothetical protein Csa_011324 [Cucumis sativus]3.53e-16470.99Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MSNLFRTI LLRSPS VFSHGFSE+PLKSL YLS SSEIVSSLK+ASL +N  QL NN KAV GLLA+HGFSESQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIPAFDYIQA+LGSEEKTL AIKR   ILGWDL+ SVGPNIEILKQ GVPDSNISSYLQ+QPKMFLTSSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKEAVERVTEMGFNPQ++QFVVAVF LR+MTKST D+KVEVYRKWG+SEEEIRLAF+KNP CM  SEDKINGAMD+FVNK+GC+   VAR P L  YSL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD
        KKR+LPRGY+YQVL+SK LIKKH + +  FNSS N FI KFINPHKEQIP LL LYK +LMD
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD

XP_016898977.1 PREDICTED: uncharacterized protein LOC103483822 [Cucumis melo]4.30e-16474.93Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSL--------NKRIIP---
        MS LFR ILLLRSPS VFSHGFSE PLKSL +LSTSSE+VSS KSASL SNAV L NN K V  LLANHGFS+SQISDLAK L         + ++P   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSL--------NKRIIP---

Query:  -----AFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFAL
             AFDYIQA+LG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVPDSNIS+YLQ+QP+MF  SSIRFKE VERVTEMGFNPQRLQF+VAVFAL
Subjt:  -----AFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFAL

Query:  RSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFAL
        RSMTKSTWD+KVEVYRKWG+SEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P LI+ SLKKRILPRGY+YQVL+SK LIK   +F+ 
Subjt:  RSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFAL

Query:  FFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP
         F+ S N FI+KFINPHKEQIP LL LYK KLMDLEDEQVR P
Subjt:  FFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP

XP_031738238.1 uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus]2.84e-18175.27Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MSN+FRTILLLRSPS  FSHGFS+SPLKSL YL TSSEIVSS KSASLPSN VQLNNN KAV GLLANHGFSESQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIP+FDYIQA+LGSEEKTL AIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWD+K+EVYRKWG+SEEEIR +FRKNP  M ASEDKIN  M FFVNK+GCEPF VAR P LIS SL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQV
        KKRI+PRGYVYQ LVSK L+KKHA+F   FNSS   FI+K+I+PHKEQIP LL LY+ KLMDLEDEQV
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQV

XP_031738239.1 transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus]7.59e-20382.56Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MSN FRTILLLRSPS +FSHGFS+SP KSL YLSTSSEIVSS KSASLPSNAVQLNNN KAV GLLANHGFSESQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIP+FDYIQA+LGSEEKTL AIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFK+AVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVE YRKWG+SEEEIRLAFRKNP CMSASEDKINGAMDFFVNKMGCEPFLVARTPTL+SYSL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQ
        KKRILPRGYVYQVLVSKCLIKK+AHFALFFNSSANLFIDKFINPHKEQIPELL LYK KLMDLEDEQ
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQ

TrEMBL top hitse value%identityAlignment
A0A1S3AX02 transcription termination factor MTEF1, chloroplastic-like isoform X11.9e-12869.34Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        M NLFR ILLLRSPS VFSHGFSE+PLKSL YLSTSSEIVSS KSASL SN VQL NN KAV  LLANHGFS+SQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIPAFDYIQA+LGS+EK L AI+RFPGIL WDLR SVGPNIEILKQ GVPDS ISSYLQRQPKMFLTSSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKE VERV EMGFNPQRLQF+VAVFALRSMTKS+WD+KVEVYRKWG+SEEEIRLAFRKNP CM+ SE+ IN  MDFFVN++GCE   +AR P+L +YSL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD
        KKRILPRGYV+QVL+SK LI+K+  F   F    N FI+K INPHK+QIP LL LYK K+MD
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD

A0A1S4DSK2 uncharacterized protein LOC1034838222.0e-13074.93Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSL--------NKRIIP---
        MS LFR ILLLRSPS VFSHGFSE PLKSL +LSTSSE+VSS KSASL SNAV L NN K V  LLANHGFS+SQISDLAK L         + ++P   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSL--------NKRIIP---

Query:  -----AFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFAL
             AFDYIQA+LG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVPDSNIS+YLQ+QP+MF  SSIRFKE VERVTEMGFNPQRLQF+VAVFAL
Subjt:  -----AFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFAL

Query:  RSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFAL
        RSMTKSTWD+KVEVYRKWG+SEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P LI+ SLKKRILPRGY+YQVL+SK LIK   +F+ 
Subjt:  RSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFAL

Query:  FFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP
         F+ S N FI+KFINPHKEQIP LL LYK KLMDLEDEQVR P
Subjt:  FFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP

A0A1S4DSL1 uncharacterized protein LOC1034838263.3e-12567.68Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MSNLFR ILLLRSPS  FSHGFSE PLK L YLSTSSEIVSS KSASL SNAVQL NN KA+  LLANHGFSESQISD+ K                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIP FDY+QA+ GSEEKTLI IKRF GIL WDLR SVGPNIEILKQIGVPDSNI  YLQ QP++FL + +
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKEAVERV EMGFNPQ+LQFVVAVF LR+MTKSTWD+KVEVYRKWG+SEEEIR+AFRK+P CM+ SEDKING MDFFVNK+GCE    AR P L+S SL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD
        KKRILPRGY+YQVL+SK LIKKH + A FF S    FI+KFINPH EQI  LL LY+ KL D
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD

A0A5A7U2J3 Transcription termination factor MTEF15.0e-12969.61Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        M NLFR ILLLRSPS VFSHGFSE+PLKSL YLSTSSEIVSS KSASL SN VQL NN KAV  LLANHGFS+SQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIPAFDYIQA+LGS+EK L AI+RFPGIL WDLR SVGPNIEILKQ GVPDS ISSYLQRQPKMFLTSSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKE VERV EMGFNPQRLQF+VAVFALRSMTKS+WD+KVEVYRKWG+SEEEIRLAFRKNP CM+ SE+ IN  MDFFVN++GCE   +AR P+L +YSL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD
        KKRILPRGYV+QVL+SK LI+K+  F   F  S N FI+K INPHK+QIP LL LYK K+MD
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMD

A0A5A7U2M1 Transcription termination factor MTEF15.3e-13170.62Show/hide
Query:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------
        MS LFR ILLLRSPS VFSHGFSE PLKSL +LSTSSE+VSS KSASL SNAV L NN K V  LLANHGFS+SQISDLAK                   
Subjt:  MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAK-------------------

Query:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI
                                 SLNKRIIPAFDYIQA+LG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVPDSNIS+YLQ+QP+MF  SSI
Subjt:  -------------------------SLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSI

Query:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL
        RFKE VERVTEMGFNP+RLQF+VAVFALRSMTKSTWD+KVEVYRKWG+SEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P LI+ SL
Subjt:  RFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSL

Query:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP
        KKRILPRGY+YQVL+SK LIK   +F+  F+ S N FI+KFINPHKEQIP LL LYK KLMDLEDEQVR P
Subjt:  KKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein2.5e-3228.38Show/hide
Query:  HGFSESPLKSL-----TYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGI
        HGF+   + S+       LS S E V S K     S     ++  K +           S    L+ SL+KR+IP +D ++++L  EE  +  +KR    
Subjt:  HGFSESPLKSL-----TYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGI

Query:  LGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFR
            +   V   + I +++GVPD +I   +Q  P  F +   RF E + RV   GF+P++  FV A+ A    ++S  + K ++++ +G S+E+   A  
Subjt:  LGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFR

Query:  KNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPHKEQIPELL
        + P C++ S++KI   +++ VN +G +   +   P ++S S++KRI PR  V  +L+SK L+KK   ++       ++ F+DKF+  +++++P+L+
Subjt:  KNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPHKEQIPELL

AT1G61970.1 Mitochondrial transcription termination factor family protein9.9e-2122.95Show/hide
Query:  SLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRII--------PAFDYIQALLGSEEKTLIAIKRFPGILGWDLR
        +++YL  S  + + L  +     + +  NN  +V  LL +HGF+ SQIS + +   + +I        P   ++Q+   S  +    +   P ILG    
Subjt:  SLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRII--------PAFDYIQALLGSEEKTLIAIKRFPGILGWDLR

Query:  TSVG---------------------------------PNIEILKQIGVPDSNISSYL--QRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALR
         ++                                   N+ +L+++G+P   + S L    QP   +    +F+E +++V EMGF+P   +FV A+  + 
Subjt:  TSVG---------------------------------PNIEILKQIGVPDSNISSYL--QRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALR

Query:  SMTKSTWDEKVEVY--------------RKW---------------------GMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPT
         M + T +EKV +Y              +KW                     G S +E     +  P C+  S + +    +F V KM      V   P 
Subjt:  SMTKSTWDEKVEVY--------------RKW---------------------GMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPT

Query:  LISYSLKKRILPRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPH--KEQIPELLALYK
        +  YSL+KRI+PRG V + L+SK L++      +     +  +F+++++  H  K+ + EL+A+Y+
Subjt:  LISYSLKKRILPRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPH--KEQIPELLALYK

AT1G62010.1 Mitochondrial transcription termination factor family protein1.2e-2125.07Show/hide
Query:  LRSPSPVFSHGFSESPLKSL-TYLSTSSEIVSSLKSAS---LPSNAVQLNNNWKAVCGLLANHGFSESQISD--------LAKSLNKRIIPAFDYIQALL
        LR  + +   G S+S L  L +Y  T S+I S ++S S   + ++A  L +  +     L + G S S++++        L K   K +   +D+I+ ++
Subjt:  LRSPSPVFSHGFSESPLKSL-TYLSTSSEIVSSLKSAS---LPSNAVQLNNNWKAVCGLLANHGFSESQISD--------LAKSLNKRIIPAFDYIQALL

Query:  GSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYL--QRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV
         +++ +           G  +R     NI +L+++GVP   +   L  + QP   +    +F  ++++V EMGF+P    FV A+  L  M+  T +EK+
Subjt:  GSEEKTLIAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYL--QRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV

Query:  EVYR--------------KW---------------------GMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRIL
         VYR              KW                     G S +   + F++ P C+  S + +    +F V +M      VA  P ++ YSL+KR +
Subjt:  EVYR--------------KW---------------------GMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRIL

Query:  PRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPH--KEQIPELLALYKGKLMDLEDEQVR
        PR  V +VL+SK L++      +    S++  F++ +++ H  K+ + EL+A++ G  + L D++ R
Subjt:  PRGYVYQVLVSKCLIKKH-AHFALFFNSSANLFIDKFINPH--KEQIPELLALYKGKLMDLEDEQVR

AT5G07900.1 Mitochondrial transcription termination factor family protein4.9e-4434.46Show/hide
Query:  HGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDL
        HGF+ + + SL        ++++ +S  LP  +  L+        LLA    S+  I  L +SL  ++IP++++++++L S+EK + A++R   +   D 
Subjt:  HGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPGILGWDL

Query:  RTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSM-TKSTWDEKVEVYRKWGMSEEEIRLAFRKNPC
          ++ PNI  + + GVP+  I   L   P+  +  +  F+   ++  EMGFNPQ+  FV+A+ AL     KS WD+  EVY++WG SE++I  AF+K+P 
Subjt:  RTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSM-TKSTWDEKVEVYRKWGMSEEEIRLAFRKNPC

Query:  CMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKG
        CM  SE KIN  M++FVN+M   P  +A+ P ++ +SL+KRI+PR  V +VLVS  L+K+             +F++K +  ++E++PEL+ LY G
Subjt:  CMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKG

AT5G64950.1 Mitochondrial transcription termination factor family protein2.0e-2930.8Show/hide
Query:  FSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPG--ILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEM
        F     S +  SL K++IP  + +++++  + + L  I    G  +L  D    + PNI  L+  G+  S ++S L+RQP++F  S  + +  V R  ++
Subjt:  FSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKRFPG--ILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEM

Query:  GFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQ
        GF       V AV +L S+++ T+D KV+++   G SE+EI    R++P  +  SEDK+    +F++ +MG E   +A+ P ++SY+L+KR++PR  V Q
Subjt:  GFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQ

Query:  VLVSKCLI----KKHAHFALFFNSSANLFIDKFINPHKEQI-PELLALYK
        +L  K L+    KK  +       +   F++K++    ++I  ELL  YK
Subjt:  VLVSKCLI----KKHAHFALFFNSSANLFIDKFINPHKEQI-PELLALYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAACTTGTTTCGCACAATCCTTCTACTTAGATCTCCATCCCCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTATCCACCTCTTC
TGAGATTGTATCATCTCTGAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAATTGGAAGGCTGTATGTGGGTTACTTGCGAATCATGGATTCTCTGAAT
CACAAATCTCTGACCTTGCCAAGAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCCTGCTTGGAAGTGAGGAGAAGACTCTCATTGCTATAAAGCGA
TTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAGCAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCA
GCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGGCTGTAGAGAGAGTTACGGAAATGGGCTTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTC
TGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGTTTATAGGAAATGGGGAATGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCATGTTGTATG
AGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTCGAACACCAACTTTAATTTCATATAGTTTGAA
GAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGCACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCA
TAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGCGTTGTATAAAGGGAAATTAATGGATTTAGAAGATGAACAGGTTCGATATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAACTTGTTTCGCACAATCCTTCTACTTAGATCTCCATCCCCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTATCCACCTCTTC
TGAGATTGTATCATCTCTGAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAATTGGAAGGCTGTATGTGGGTTACTTGCGAATCATGGATTCTCTGAAT
CACAAATCTCTGACCTTGCCAAGAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAAGCCCTGCTTGGAAGTGAGGAGAAGACTCTCATTGCTATAAAGCGA
TTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAGCAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCA
GCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGGCTGTAGAGAGAGTTACGGAAATGGGCTTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTC
TGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGTTTATAGGAAATGGGGAATGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCATGTTGTATG
AGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTCGAACACCAACTTTAATTTCATATAGTTTGAA
GAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGCACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCA
TAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGCGTTGTATAAAGGGAAATTAATGGATTTAGAAGATGAACAGGTTCGATATCCTTGA
Protein sequenceShow/hide protein sequence
MSNLFRTILLLRSPSPVFSHGFSESPLKSLTYLSTSSEIVSSLKSASLPSNAVQLNNNWKAVCGLLANHGFSESQISDLAKSLNKRIIPAFDYIQALLGSEEKTLIAIKR
FPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEVYRKWGMSEEEIRLAFRKNPCCM
SASEDKINGAMDFFVNKMGCEPFLVARTPTLISYSLKKRILPRGYVYQVLVSKCLIKKHAHFALFFNSSANLFIDKFINPHKEQIPELLALYKGKLMDLEDEQVRYP