; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy6G113120 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G113120
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationchrH06:5498160..5500341
RNA-Seq ExpressionChy6G113120
SyntenyChy6G113120
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]1.46e-8797.01Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]4.19e-8797.01Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLML V
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

XP_022955603.1 signal recognition particle 19 kDa protein [Cucurbita moschata]3.31e-8494.78Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

XP_022979984.1 signal recognition particle 19 kDa protein [Cucurbita maxima]4.70e-8494.03Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]6.96e-8695.52Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein1.7e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein3.8e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLML V
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein1.8e-6493.33Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGE+PNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQ+ML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGRRKKK
        AELVPRHPGRTKKQEPASSSTAGPSK GKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGRRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein6.1e-6594.78Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein7.9e-6594.03Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLML +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKG RKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGRRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein7.7e-2550.38Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGRRKK
        +   RT+K   A  S     G  KGKG++KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGRRKK

P49964 Signal recognition particle 19 kDa protein7.0e-5073.44Show/hide
Query:  NIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVPR
        +IK+W V+YPVY+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRVQLKK+DG+  NPAI ++KQLM+ +AELVP+
Subjt:  NIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVPR

Query:  HPGRTKKQEPASSSTAGPSKGKGRRKKK
        H GRTKKQEPA+SSTAG SKGKG +KKK
Subjt:  HPGRTKKQEPASSSTAGPSKGKGRRKKK

Q5RBR1 Signal recognition particle 19 kDa protein7.7e-2550.38Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGRRKK
        +   RT+K   A  S     G  KGKG++KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGRRKK

Q943Z6 Signal recognition particle 19 kDa protein1.3e-4868.97Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MD    NIK+WVV+YPVYINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM  +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGRRKKK
        AELVPRHP R KKQE          A++ST+G S   GKG +KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGRRKKK

Q9D7A6 Signal recognition particle 19 kDa protein3.5e-2550.38Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML VAE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVP

Query:  RHPGRTKKQ---EPASSSTAGPSKGKGRRKK
        +   RT+K    +P      G  KGKG++KK
Subjt:  RHPGRTKKQ---EPASSSTAGPSKGKGRRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative9.3e-5068.97Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV
        MD    NIK+WVV+YPVYINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM  +
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLV

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGRRKKK
        AELVPRHP R KKQE          A++ST+G S   GKG +KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGRRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCGTTTATATTAATTCAAAGAAAACAATTGCGGAAGGAAGACGTATAGGTGTTAGCAAAGCTTG
TGAGAATCCTACGTGTGCTGAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCAGCTGAAGAAGGAGGATGGAGCTCTGTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCTTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTAGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCGTTTATATTAATTCAAAGAAAACAATTGCGGAAGGAAGACGTATAGGTGTTAGCAAAGCTTG
TGAGAATCCTACGTGTGCTGAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCAGCTGAAGAAGGAGGATGGAGCTCTGTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCTTGTAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ACTAAGAAGCAGGAGCCGGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTAGAAGAAAGAAGAAATAG
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLLVAELVPRHPGR
TKKQEPASSSTAGPSKGKGRRKKK