CuGenDBv2

Gene ID	Chy6G113160
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNA binding protein
Genome location	chrH06:5529131..5529823
RNA-Seq Expression	Chy6G113160
Synteny	Chy6G113160
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADN34038.1 DNA binding protein [Cucumis melo subsp. melo]

4.18e-142

94.62

Show/hide

Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKD
        SNGDAV SER VEEEEYKL EK+
Subjt:  SNGDAVDSERKVEEEEYKLQEKD

KAA0052154.1 DNA binding protein [Cucumis melo var. makuwa]

2.63e-148

94.78

Show/hide

Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
        SNGDAV SER VEEEEYKL EK+VTAIFDL
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL

KAE8650412.1 hypothetical protein Csa_010702 [Cucumis sativus]

4.10e-159

98.7

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Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQHSNHLQSNSISHCQ+CGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
        SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL

XP_004147629.1 uncharacterized protein LOC101204799 [Cucumis sativus]

7.11e-153

98.65

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Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQHSNHLQSNSISHCQ+CGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKD
        SNGDAVDSERKVEEEEYKLQEKD
Subjt:  SNGDAVDSERKVEEEEYKLQEKD

XP_016899011.1 PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo]

4.91e-144

92.58

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Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD
        SNGDAV SER VEEEEYKL EK+   +F+
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5G4 Uncharacterized protein

2.2e-123

98.7

Show/hide

Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQHSNHLQSNSISHCQ+CGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
        SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL

A0A1S4DSP5 uncharacterized protein LOC103483924

6.7e-112

92.58

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Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD
        SNGDAV SER VEEEEYKL EK+   +F+
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD

A0A5A7U9X0 DNA binding protein

3.8e-115

94.78

Show/hide

Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL
        SNGDAV SER VEEEEYKL EK+VTAIFDL
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFDL

A0A6J1IXP5 uncharacterized protein LOC111479468

2.7e-89

78.17

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Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNR H NHLQSNSIS+C ECGISQSVCWILHNVR KA+FRRLCTNCVLK+NLSRFCPLCFD+Y+DSTPP SH RVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDP F FFDGFDS GSL QSE  V+ LAG+  D KS KAIVAAARV AQSMRRAA DARAVAEMK +NA FAKKQATLALE+LAYLVLQEKD+NGY+K
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD
        +NG+A     + EEEE +LQ + VTAI +
Subjt:  SNGDAVDSERKVEEEEYKLQEKDVTAIFD

E5GC39 DNA binding protein

5.6e-111

94.62

Show/hide

Query:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQECGISQS CWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGK+VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVDSERKVEEEEYKLQEKD
        SNGDAV SER VEEEEYKL EK+
Subjt:  SNGDAVDSERKVEEEEYKLQEKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G09520.1 LOCATED IN: chloroplast

3.0e-24

35.44

Show/hide

Query:  SNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCF--RCPSISHLSCVSFRFSSTFLCPLCSDPR-F
        +NS   C +CG S +  W++H VR +A+ R  CT+C+L+++ + FCP CF +Y+ S  PPS  RV C    C S++H+ C       ++LCP C DP  F
Subjt:  SNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCF--RCPSISHLSCVSFRFSSTFLCPLCSDPR-F

Query:  VFFDGF-DSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAV
         FF    D  GS             + VD    +A + AA+++A SM +A + A+   + + K AA AKK+A  ALEQ+  L  +EK ++   K     V
Subjt:  VFFDGF-DSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAV

Query:  DSERKV
        D + K+
Subjt:  DSERKV

AT3G17460.1 PHD finger family protein

2.6e-15

31.55

Show/hide

Query:  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFS--------------STFLCPLCSDPRFVFFDGFDS
        +H V     FRRLCT+C+LK     FC +CF++++++ PP +  R++C  CPS +HLSC +   S              S+F C  CS+P F FF     
Subjt:  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFS--------------STFLCPLCSDPRFVFFDGFDS

Query:  GGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSN
             +S           +  KS  A+VAA  +S  +M +A    +  A  KI  A  AK +A  AL  L  +V+++    G  K +
Subjt:  GGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAAGAGTGCGGCATCTCTCAATCCGTCTGTTGGATCCTCCACAATGTTCGTCACAAAGC
CACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCACC
GAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTC
GATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAGATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCG
TGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCGAAGAAACAAGCTACTCTCGCATTGGAAC
AGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAG
GAGAAAGATGTAACCGCCATTTTCGATCTATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MNRQHSNHLQSNSISHCQECGISQSVCWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFF
DGFDSGGSLCQSESTVAFLAGKDVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQ
EKDVTAIFDL

Chy6G113160 (gene) of Cucumber (hystrix) v1 genome