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Chy6G113200 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G113200
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRibosomal protein S7
Genome locationchrH06:5558209..5559639
RNA-Seq ExpressionChy6G113200
SyntenyChy6G113200
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56109.1 ribosomal protein S7 [Cucumis melo subsp. melo]2.46e-3888.89Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQTLNRPAQTE DGIK+MVEAVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

WP_131796637.1 30S ribosomal protein S7 [Candidatus Frankia datiscae]3.30e-3685.19Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQT +RPAQTERD IK+MV+AVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

XP_004153644.3 uncharacterized protein LOC101218585 [Cucumis sativus]2.53e-3887.65Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRT+VR IL QTLNRPAQTERDGIK+MVEAVENIKPICEVEKVRVA TFY  P IVA DRQQTLAIRWI EAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

YP_004849323.1 ribosomal protein S7 [Cucumis sativus]2.74e-4293.83Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAILYQTLNRPAQTERDGIK+MVEAVENIKPICEVEKVRVA TFY  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

YP_010137161.1 ribosomal protein S7 [Tolypanthus maclurei]1.15e-3685.19Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQT +RPA+TERD IK+MV+AVENIKPICEVEKVRVA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

TrEMBL top hitse value%identityAlignment
A0A3Q9CRZ5 Ribosomal protein S73.0e-2988.89Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQTLNRPAQTE DGIK+MVEAVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

A0A5A7UX17 Ribosomal protein S7 (Mitochondrion)3.0e-2988.89Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQTLNRPAQTE DGIK+MVEAVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

A0A5D3DUQ4 Ribosomal protein S7 (Mitochondrion)3.0e-2988.89Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQTLNRPAQTE DGIK+MVEAVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

G3EIX5 Ribosomal protein S72.9e-3293.83Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAILYQTLNRPAQTERDGIK+MVEAVENIKPICEVEKVRVA TFY  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

G3EU25 Ribosomal protein S73.0e-2988.89Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQTLNRPAQTE DGIK+MVEAVENIKPICEVEKV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

SwissProt top hitse value%identityAlignment
A1WVC6 30S ribosomal protein S71.8e-1044.19Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLA
        M +GKR+    ILY  L R      D I++M  A+EN+KP  EV+  RV    Y  P  V  +R+QTLA+RW+LEAA KR  + +A
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLA

P26867 Ribosomal protein S7, mitochondrial7.4e-1752.81Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI
        M +GK+TR RAI+Y+T +R A    D IK++V A+EN+KPICEV+KVR++ T    P I+A +RQ+TLAIRW+LE+A KRR    + S+
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI

P92557 Ribosomal protein S7, mitochondrial5.0e-2982.72Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQT +RPA+TERD IK+MV+AVENIKPICEV KV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

Q01902 Ribosomal protein S7, mitochondrial7.4e-2575.31Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        M +GKRTRVRAI+Y+T +R A+TERD IK+MV+AV+NIKPICEV KV VA T Y  P IVARDRQQTLAIRWIL AAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

Q9MF82 Ribosomal protein S7, mitochondrial1.2e-2779.01Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRT+VRAI+YQT +R A+TE D IK+M++AVENIKPIC+VEKVRVA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein3.5e-3082.72Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQT +RPA+TERD IK+MV+AVENIKPICEV KV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR

ATCG00900.1 Ribosomal protein S7p/S5e family protein7.9e-0630Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQ-TERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI
        +K GK++    I+Y+ L +  Q TE + + ++ +A+  + P   V+  RV  + +  P  +   + + LAIRW+L A+ KR  +N+AF +
Subjt:  MKEGKRTRVRAILYQTLNRPAQ-TERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI

ATCG01240.1 ribosomal protein S77.9e-0630Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQ-TERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI
        +K GK++    I+Y+ L +  Q TE + + ++ +A+  + P   V+  RV  + +  P  +   + + LAIRW+L A+ KR  +N+AF +
Subjt:  MKEGKRTRVRAILYQTLNRPAQ-TERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSI

ATMG01270.1 mitochondrial ribosomal protein S73.5e-3082.72Show/hide
Query:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR
        MKEGKRTRVRAI+YQT +RPA+TERD IK+MV+AVENIKPICEV KV VA T Y  P IVARDRQQTLAIRWILEAAFKRR
Subjt:  MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTCTTTATCAAACTTTAAATCGTCCAGCACAAACTGAACGCGATGGAATCAAAATTATGGTTGAGGCCGTAGAGAA
TATAAAGCCCATATGCGAAGTCGAAAAAGTCAGAGTAGCCGTTACTTTTTATCATGATCCTGAGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCC
TTGAAGCAGCTTTCAAACGACGTAGACAAAATTTGGCATTTAGCATAGTGTATGGAAATCAAGATAAGAGGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTCTTTATCAAACTTTAAATCGTCCAGCACAAACTGAACGCGATGGAATCAAAATTATGGTTGAGGCCGTAGAGAA
TATAAAGCCCATATGCGAAGTCGAAAAAGTCAGAGTAGCCGTTACTTTTTATCATGATCCTGAGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCC
TTGAAGCAGCTTTCAAACGACGTAGACAAAATTTGGCATTTAGCATAGTGTATGGAAATCAAGATAAGAGGCAATAA
Protein sequenceShow/hide protein sequence
MKEGKRTRVRAILYQTLNRPAQTERDGIKIMVEAVENIKPICEVEKVRVAVTFYHDPEIVARDRQQTLAIRWILEAAFKRRRQNLAFSIVYGNQDKRQ