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Chy6G116170 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G116170
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH06:9071059..9071852
RNA-Seq ExpressionChy6G116170
SyntenyChy6G116170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57542.1 hypothetical protein Csa_010005 [Cucumis sativus]9.63e-2647.65Show/hide
Query:  VRQEFPNNSRRRSMCVGSFQTTPNVVQCVSGVFKHLLTLTTIVGSWPPSPNVSQHCVESFQTNIDALVVRRKIL--------------YLLTLQLECREI
        +RQEFP            F    +VVQ  S V KHLLTLT+IVG+WPP  NVSQHCVESFQTN++ALVVR                  ++  L       
Subjt:  VRQEFPNNSRRRSMCVGSFQTTPNVVQCVSGVFKHLLTLTTIVGSWPPSPNVSQHCVESFQTNIDALVVRRKIL--------------YLLTLQLECREI

Query:  SSSSFPPHRISVHLLPLLSAVSHQSSSPLTFAIRLHRQHPPSPCRSSPQ
        SSSS P  RIS   +  +S  +H S S LT AIRLHRQ PPSPCR  P+
Subjt:  SSSSFPPHRISVHLLPLLSAVSHQSSSPLTFAIRLHRQHPPSPCRSSPQ
TrEMBL top hitse value%identityAlignment
A0A0A0LAA6 Uncharacterized protein3.9e-1947.65Show/hide
Query:  VRQEFPNNSRRRSMCVGSFQTTPNVVQCVSGVFKHLLTLTTIVGSWPPSPNVSQHCVESFQTNIDALVVRRKIL--------------YLLTLQLECREI
        +RQEFP            F    +VVQ  S V KHLLTLT+IVG+WPP  NVSQHCVESFQTN++ALVVR                  ++  L       
Subjt:  VRQEFPNNSRRRSMCVGSFQTTPNVVQCVSGVFKHLLTLTTIVGSWPPSPNVSQHCVESFQTNIDALVVRRKIL--------------YLLTLQLECREI

Query:  SSSSFPPHRISVHLLPLLSAVSHQSSSPLTFAIRLHRQHPPSPCRSSPQ
        SSSS P  RIS   +  +S  +H S S LT AIRLHRQ PPSPCR  P+
Subjt:  SSSSFPPHRISVHLLPLLSAVSHQSSSPLTFAIRLHRQHPPSPCRSSPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCGTCAAGAGTTCCCAAACAACTCCCGTCGTCGCTCAATGTGTGTCGGGAGTTTCCAAACAACTCCCAACGTAGTTCAATGTGTGTCGGGAGTTTTCAAACATCTCCT
AACGCTTACTACTATCGTTGGGAGTTGGCCTCCGTCTCCCAACGTCTCCCAACACTGCGTCGAAAGTTTTCAAACAAATATCGACGCTTTAGTTGTGCGTCGAAAGATAC
TATATCTCCTGACGCTCCAATTGGAATGTCGAGAGATTTCGTCTTCTTCCTTTCCTCCCCATCGTATCTCAGTTCATCTTCTTCCTCTCCTCTCTGCCGTATCTCATCAG
TCGTCTTCGCCTCTGACTTTCGCCATTCGTCTTCACCGTCAGCATCCTCCCTCTCCTTGTCGTTCGTCTCCTCAG
mRNA sequenceShow/hide mRNA sequence
GTGCGTCAAGAGTTCCCAAACAACTCCCGTCGTCGCTCAATGTGTGTCGGGAGTTTCCAAACAACTCCCAACGTAGTTCAATGTGTGTCGGGAGTTTTCAAACATCTCCT
AACGCTTACTACTATCGTTGGGAGTTGGCCTCCGTCTCCCAACGTCTCCCAACACTGCGTCGAAAGTTTTCAAACAAATATCGACGCTTTAGTTGTGCGTCGAAAGATAC
TATATCTCCTGACGCTCCAATTGGAATGTCGAGAGATTTCGTCTTCTTCCTTTCCTCCCCATCGTATCTCAGTTCATCTTCTTCCTCTCCTCTCTGCCGTATCTCATCAG
TCGTCTTCGCCTCTGACTTTCGCCATTCGTCTTCACCGTCAGCATCCTCCCTCTCCTTGTCGTTCGTCTCCTCAG
Protein sequenceShow/hide protein sequence
VRQEFPNNSRRRSMCVGSFQTTPNVVQCVSGVFKHLLTLTTIVGSWPPSPNVSQHCVESFQTNIDALVVRRKILYLLTLQLECREISSSSFPPHRISVHLLPLLSAVSHQ
SSSPLTFAIRLHRQHPPSPCRSSPQ