; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy6G121900 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G121900
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGirdin-like
Genome locationchrH06:19280809..19282027
RNA-Seq ExpressionChy6G121900
SyntenyChy6G121900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062685.1 girdin-like [Cucumis melo var. makuwa]1.23e-9968.6Show/hide
Query:  EQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVNDLNTSIGK
        EQ+NEK+ KE SQWMDHA +LQ EL+KTKSFL+N DKLEK+LE LDKEMR MNKANR+LKNEKTTLQAT+ S++EYIKDLE+GKEYFLE VNDLNTSIGK
Subjt:  EQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVNDLNTSIGK

Query:  REAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRSTIEFLKIVS
        RE QI+DLEA NHSLRQTVDSLH+KM E  EEY+ILKNY  SLHYQL A QNSS R+      L                 F V+      TIEFL++VS
Subjt:  REAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRSTIEFLKIVS

Query:  RRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        +RANGFA+W  DLR+NFFS QPHA+ LNRFLKM+CRELGHFG
Subjt:  RRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

TYK18656.1 girdin-like [Cucumis melo var. makuwa]6.83e-10066.93Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        K+K +NRLLEQ+NEK+ KE SQWMDH   LQ ELEKTKSFL+N DKLEK+LE  DKEMR MNKANR+LKNEKTTLQAT+ S+DEYIKDLE+GKEYFLELV
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRS
        NDLNTSIGKRE QI+DLEA NHSLRQTVD+LH+KM E  EEY+ILKNY  SLHYQL A QNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TIEFL+++S+RANGFA+W  DLR+ FFS  PHA+ LN+FLKM+CRELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

TYK23632.1 girdin-like [Cucumis melo var. makuwa]2.41e-10468Show/hide
Query:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN
        ++ +NRLLEQ+NEK+ KE SQW+DHA +LQ ELEKTKSFL+N DKLEK++E LDKEMR MNKANR LKNEKTTLQAT+ S+DEYIKDLE+GKEYFLELVN
Subjt:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN

Query:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST
        DLNTSIGKRE QI+DLEA NHSL QTVDSLH+KM E  EEY+ILKNY  SLHYQL A QNSS R+      L                 F V+      T
Subjt:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST

Query:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        IEFL++VS+RANGFA+W  DLR+NFFS QPHA+ LNRFLKM+CRELGHFG
Subjt:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

TYK23955.1 girdin-like [Cucumis melo var. makuwa]3.17e-9967.2Show/hide
Query:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN
        ++ +NRLLEQ+NEK+ KE SQWMDHA +LQ ELEK KS L+N DKLEKNLE LDKEMR MNKANR+LKNEKTTL+AT+ S+DEYIKDLESGKEYFLE VN
Subjt:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN

Query:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST
        DL+TSIG RE QI+DLEAHNHSLRQ VDSLH+KMVE  EEY+ILKNY  SLHYQLIAFQNSS R+      L                 F V+      T
Subjt:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST

Query:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        I+FL++VS+RAN FA+W  DLR+NFFS Q HA+ LNRFLKM+C+ELGHFG
Subjt:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

XP_016900531.1 PREDICTED: girdin-like [Cucumis melo]3.21e-10067.2Show/hide
Query:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN
        ++ +NRLLEQ+NEK+ KE SQWMDHA +LQ ELEK KS L+N DKLEKNLE LDKEMR MNKANR+LKNEKTTL+AT+ S+DEYIKDLESGKEYFLE VN
Subjt:  IKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVN

Query:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST
        DL+TSIG RE QI+DLEAHNHSLRQ VDSLH+KMVE  EEY+ILKNY  SLHYQLIAFQNSS R+      L                 F V+      T
Subjt:  DLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L*-----------FAKERFLVVS*TCRST

Query:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        I+FL++VS+RAN FA+W  DLR+NFFS Q HA+ LNRFLKM+C+ELGHFG
Subjt:  IEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

TrEMBL top hitse value%identityAlignment
A0A1S4DX26 girdin-like1.5e-8266.93Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        +++ +NRLLEQ+NEK+ KE SQWMDHA +LQ ELEK KS L+N DKLEKNLE LDKEMR MNKANR+LKNEKTTL+AT+ S+DEYIKDLESGKEYFLE V
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS
        NDL+TSIG RE QI+DLEAHNHSLRQ VDSLH+KMVE  EEY+ILKNY  SLHYQLIAFQNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TI+FL++VS+RAN FA+W  DLR+NFFS Q HA+ LNRFLKM+C+ELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

A0A5A7T6E2 Girdin-like3.0e-8367.33Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        +++ +NRLLEQ+NEK+ KE SQWMDHA +LQ +LEKTKSFL+N DKLEK+LE LDKEMR MNKANR+LKNEKTT QAT+ S+DEYIKDLE+GKEYFL+LV
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS
        NDLNTSI KRE +I+DLEA NHSLRQTVDSLH+KMVEH EEY+ILKNYA SLHYQL A QNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TIEFL++VS+RAN FA+   DLR+NFFS QPHA+ LNRFLKM+CRELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

A0A5D3D533 Girdin-like3.3e-8266.93Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        K+K +NRLLEQ+NEK+ KE SQWMDH   LQ ELEKTKSFL+N DKLEK+LE  DKEMR MNKANR+LKNEKTTLQAT+ S+DEYIKDLE+GKEYFLELV
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS
        NDLNTSIGKRE QI+DLEA NHSLRQTVD+LH+KM E  EEY+ILKNY  SLHYQL A QNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TIEFL+++S+RANGFA+W  DLR+ FFS  PHA+ LN+FLKM+CRELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

A0A5D3DJ95 Girdin-like4.2e-8567.73Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        +++ +NRLLEQ+NEK+ KE SQW+DHA +LQ ELEKTKSFL+N DKLEK++E LDKEMR MNKANR LKNEKTTLQAT+ S+DEYIKDLE+GKEYFLELV
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS
        NDLNTSIGKRE QI+DLEA NHSL QTVDSLH+KM E  EEY+ILKNY  SLHYQL A QNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TIEFL++VS+RANGFA+W  DLR+NFFS QPHA+ LNRFLKM+CRELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

A0A5D3DK34 Girdin-like1.5e-8266.93Show/hide
Query:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV
        +++ +NRLLEQ+NEK+ KE SQWMDHA +LQ ELEK KS L+N DKLEKNLE LDKEMR MNKANR+LKNEKTTL+AT+ S+DEYIKDLESGKEYFLE V
Subjt:  KIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDKEMR*MNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELV

Query:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS
        NDL+TSIG RE QI+DLEAHNHSLRQ VDSLH+KMVE  EEY+ILKNY  SLHYQLIAFQNSS R+      L                 F V+      
Subjt:  NDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNSSDRLYGNEG*L-----------*FAKERFLVVS*TCRS

Query:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG
        TI+FL++VS+RAN FA+W  DLR+NFFS Q HA+ LNRFLKM+C+ELGHFG
Subjt:  TIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGGACCCAACATATCCAAGGAAGGAGACTTGTGTGTCTTTCTTTTCAACAATGAGTTCTGAAAATGTCATATGAAAGGCTCAATGGATGCCATTGAAGGCGG
TGATTTATAGATGTGGAGATGTTCATAGTGTGCCTTTGTTGGGACCATGAGGGGTGTTAACTATACAACATTTTTAGTTTTGCGTTAGGTATGGCTGAAACAGTT
TATACCACTAACTCATAATCTACAAGACTCTGACTTTTCATACGATCTTGAAGATTGTCATGGAAAAAAACGTTGAGCAGTATATGTATGGAAATCTATGAGGAA
GATAAAAGACAAAGGACACTATGAAGGAGTTACCAGTGGATACGAGGCATGGCAGGCAAACAGAATGAAGAATGTAATAGATACCTTAAGGGAGGTAGTTGAAAG
AGTAGAAGAGACAAGCTTTGAACAACCAAACCAGTGGGTTGAGAAGAGCATAAAATTAAAAGAGAAAATCGACTATTAGAGCAAGACAATGAGAAAATTTGTAAA
GAGAAAAGTCAATGGATGGATCATGCGAATTTTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAGAAATCCAGATAAGTTAGAAAAGAATCTTGAGGTG
TTAGATAAAGAGATGAGGTGAATGAATAAAGCAAATAGAACGTTGAAAAATGAAAAGACAACATTACAGGCAACAATAGTATCAAAAGATGAATATATTAAAGAT
TTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATTTGAATACATCAATTGGAAAACGGGAAGCACAAATAGTAGATTTGGAAGCACACAATCATTCT
CTACGTCAAACTGTTGATAGCTTACATGTGAAGATGGTCGAGCACTTTGAAGAGTATAAGATACTGAAAAATTATGCTAGTTCCTTACACTATCAACTTATTGCA
TTTCAAAATTCAAGTGACAGATTATATGGGAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTCTAGTTGTTAGTTAAACGTGTAGATCGACGATTGAATTT
CTCAAAATAGTGTCTAGAAGAGCAAATGGTTTTGCAAAATGGACAACTGATTTAAGGATTAATTTTTTCTCAAGGCAACCTCATGCAAATTATCTGAATAGATTC
TTGAAGATGTTATGCAGAGAACTTGGACATTTTGGTCTTCATTAATTGTTTATTTTGCTATTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGGACCCAACATATCCAAGGAAGGAGACTTGTGTGTCTTTCTTTTCAACAATGAGTTCTGAAAATGTCATATGAAAGGCTCAATGGATGCCATTGAAGGCGG
TGATTTATAGATGTGGAGATGTTCATAGTGTGCCTTTGTTGGGACCATGAGGGGTGTTAACTATACAACATTTTTAGTTTTGCGTTAGGTATGGCTGAAACAGTT
TATACCACTAACTCATAATCTACAAGACTCTGACTTTTCATACGATCTTGAAGATTGTCATGGAAAAAAACGTTGAGCAGTATATGTATGGAAATCTATGAGGAA
GATAAAAGACAAAGGACACTATGAAGGAGTTACCAGTGGATACGAGGCATGGCAGGCAAACAGAATGAAGAATGTAATAGATACCTTAAGGGAGGTAGTTGAAAG
AGTAGAAGAGACAAGCTTTGAACAACCAAACCAGTGGGTTGAGAAGAGCATAAAATTAAAAGAGAAAATCGACTATTAGAGCAAGACAATGAGAAAATTTGTAAA
GAGAAAAGTCAATGGATGGATCATGCGAATTTTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAGAAATCCAGATAAGTTAGAAAAGAATCTTGAGGTG
TTAGATAAAGAGATGAGGTGAATGAATAAAGCAAATAGAACGTTGAAAAATGAAAAGACAACATTACAGGCAACAATAGTATCAAAAGATGAATATATTAAAGAT
TTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATTTGAATACATCAATTGGAAAACGGGAAGCACAAATAGTAGATTTGGAAGCACACAATCATTCT
CTACGTCAAACTGTTGATAGCTTACATGTGAAGATGGTCGAGCACTTTGAAGAGTATAAGATACTGAAAAATTATGCTAGTTCCTTACACTATCAACTTATTGCA
TTTCAAAATTCAAGTGACAGATTATATGGGAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTCTAGTTGTTAGTTAAACGTGTAGATCGACGATTGAATTT
CTCAAAATAGTGTCTAGAAGAGCAAATGGTTTTGCAAAATGGACAACTGATTTAAGGATTAATTTTTTCTCAAGGCAACCTCATGCAAATTATCTGAATAGATTC
TTGAAGATGTTATGCAGAGAACTTGGACATTTTGGTCTTCATTAATTGTTTATTTTGCTATTAA
Protein sequenceShow/hide protein sequence
FGTQHIQGRRLVCLSFQQVLKMSYERLNGCH*RR*FIDVEMFIVCLCWDHEGC*LYNIFSFALGMAETVYTTNSSTRL*LFIRS*RLSWKKTLSSICMEIYEEDK
RQRTL*RSYQWIRGMAGKQNEECNRYLKGGSKSRRDKL*TTKPVG*EEHKIKRENRLLEQDNEKICKEKSQWMDHANFLQKELEKTKSFLRNPDKLEKNLEVLDK
EMRMNKANRTLKNEKTTLQATIVSKDEYIKDLESGKEYFLELVNDLNTSIGKREAQIVDLEAHNHSLRQTVDSLHVKMVEHFEEYKILKNYASSLHYQLIAFQNS
SDRLYGNEGL*FAKERFLVVS*TCRSTIEFLKIVSRRANGFAKWTTDLRINFFSRQPHANYLNRFLKMLCRELGHFGLHLFILLLX