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Chy6G122020 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy6G122020
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGirdin-like
Genome locationchrH06:19281625..19282034
RNA-Seq ExpressionChy6G122020
SyntenyChy6G122020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036955.1 girdin-like [Cucumis melo var. makuwa]1.23e-2381.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
KAA0046902.1 girdin-like [Cucumis melo var. makuwa]8.00e-2481.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
TYK20948.1 girdin-like [Cucumis melo var. makuwa]3.27e-2581.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]8.11e-2485.45Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVW+PTYP+KET VSFFST+SSE+VI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
XP_031740432.1 uncharacterized protein LOC116403430 [Cucumis sativus]1.20e-2385.45Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVW+PTYP+KET VSFFST+SSE+VI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein1.1e-1881.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
A0A5A7T5S7 Girdin-like1.1e-1881.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
A0A5A7T642 Girdin-like1.1e-1881.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
A0A5D3BYI1 Girdin-like1.1e-1881.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
A0A5D3DBS6 Girdin-like1.1e-1881.82Show/hide
Query:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
        MAVWDPTYPRKE  +SFF+ ++SENVI KAQWMPLKAVIYRCGD HSVPLLGP G
Subjt:  MAVWDPTYPRKETCVSFFSTMSSENVI*KAQWMPLKAVIYRCGDVHSVPLLGP*G
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTGGGACCCAACATATCCAAGGAAGGAGACTTGTGTGTCTTTCTTTTCAACAATGAGTTCTGAAAATGTCATATGAAAGGCTCAATGGATGCCATTG
AAGGCGGTGATTTATAGATGTGGAGATGTTCATAGTGTGCCTTTGTTGGGACCATGAGGGGTGTTAACTATACAACATTTTTAGTTTTGCGTTAGGTATGGCTGA
AACAGTTTATACCACTAACTCATAATCTACAAGACTCTGACTTTTCATACGATCTTGAAGATTGTCATGGAAAAAAACGTTGAGCAGTATATGTATGGAAATCTA
TGAGGAAGATAAAAGACAAAGGACACTATGAAGGAGTTACCAGTGGATACGAGGCATGGCAGGCAAACAGAATGAAGAATGTAATAGATACCTTA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTGGGACCCAACATATCCAAGGAAGGAGACTTGTGTGTCTTTCTTTTCAACAATGAGTTCTGAAAATGTCATATGAAAGGCTCAATGGATGCCATTG
AAGGCGGTGATTTATAGATGTGGAGATGTTCATAGTGTGCCTTTGTTGGGACCATGAGGGGTGTTAACTATACAACATTTTTAGTTTTGCGTTAGGTATGGCTGA
AACAGTTTATACCACTAACTCATAATCTACAAGACTCTGACTTTTCATACGATCTTGAAGATTGTCATGGAAAAAAACGTTGAGCAGTATATGTATGGAAATCTA
TGAGGAAGATAAAAGACAAAGGACACTATGAAGGAGTTACCAGTGGATACGAGGCATGGCAGGCAAACAGAATGAAGAATGTAATAGATACCTTA
Protein sequenceShow/hide protein sequence
MAVWDPTYPRKETCVSFFSTMSSENVIKAQWMPLKAVIYRCGDVHSVPLLGP*GVLTIQHFFCVRYG*NSLYH*LIIYKTLTFHTILKIVMEKNVEQYMYGNL*G
R*KTKDTMKELPVDTRHGRQTERM**IPX