CuGenDBv2

Gene ID	Chy7G141900
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	chrH07:18214680..18216144
RNA-Seq Expression	Chy7G141900
Synteny	Chy7G141900
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146894.2 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.27e-167

96.67

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDV NRDDGA QQ+RRGN ASAVVK EEDNNDDWNNNGERFTDKRWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFV+NGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTG+GIVGQSGNFICKTALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK
        LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK

XP_008453842.1 PREDICTED: uncharacterized protein LOC103494445 [Cucumis melo]

4.64e-155

92.15

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Query:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVAS-AVVKVEEDNNDDWNNNGERFTDKRWKN
        M+SIAISASLPRA+N NHVSMKKKQ+  HLAKP YSS TKNPTPKVISTLDVGNRDDGA QQ  H RGNVAS AVVKVEEDN DDWNNNGERFTDKRWKN
Subjt:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVAS-AVVKVEEDNNDDWNNNGERFTDKRWKN

Query:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK
        GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLE+HPEAATN+EPV+FRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGY VDALTGIGIVGQSGNFICK
Subjt:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK

Query:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK
        TALFLTVIGVLLFRQSED+ENLRNIAEEATFYDKQWQSSWQK
Subjt:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK

XP_022984403.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

3.36e-121

76.37

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISAS  R+  SNHVS KK+Q    A+P YSS TKNPTP++I T DVGNRD       R GNVASA  K+EED +D   N+G+ FTD+RWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFVKNGKMDWEGVIV EAKRRKFLE++PE ATNQEPV+FRSSIIPWW WLTKSYLPQAELLNGRAAMIGFFM Y VDALTGIGIVGQSGNFI K ALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        +TVIGVLLFRQ++DIE LR +AEEATFYDKQWQ+SWQ
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

XP_023551912.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo subsp. pepo]

2.93e-118

74.68

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISAS PR+  SNHVS K +Q    A+P +SS TKNPTP++I T DVG+RD     + R GNVASA  K+EED +D   N+G+ FTD+RWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFVKNGKMDWEGVIV EAKRRKFLE++PE ATN EPV+FRSSIIPWW WLT+SYLPQAELLNGRAAMIGFFM Y VDALTGIGIVGQSGNFI K+ALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        +TVIGVLLFRQ++DIE LR +AEEATFYDKQWQ+SWQ
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

XP_038875279.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

6.50e-125

79.83

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDD-GAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTW
        M+SIAISASLPRAS SNHV +K                KNPT KVISTLDVG+RD  GAV++H  GNVASA  KVEEDN DDWN+ GE+FTDKRWKNGTW
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDD-GAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTW

Query:  DLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTAL
        DLNMFVKNGKMDWEGVIV EAKRRKFLE++PEAATNQEPV+FRSS+IPWW WLTKSYLPQAELLNGRAAMIGFFM Y VDALTGIGIVGQSGNFICK AL
Subjt:  DLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTAL

Query:  FLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        F TVIGVLLFRQ+EDIE+LRNIAEEAT YDKQWQ+SWQ
Subjt:  FLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUF5 Uncharacterized protein

2.8e-129

96.67

Show/hide

Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDV NRDDGA QQ+RRGN ASAVVK EEDNNDDWNNNGERFTDKRWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFV+NGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTG+GIVGQSGNFICKTALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK
        LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKPK

A0A1S3BXB8 uncharacterized protein LOC103494445

9.0e-120

92.15

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Query:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVA-SAVVKVEEDNNDDWNNNGERFTDKRWKN
        M+SIAISASLPRA+N NHVSMKKKQ+  HLAKP YSS TKNPTPKVISTLDVGNRDDGA QQ  H RGNVA SAVVKVEED NDDWNNNGERFTDKRWKN
Subjt:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVA-SAVVKVEEDNNDDWNNNGERFTDKRWKN

Query:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK
        GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLE+HPEAATN+EPV+FRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGY VDALTGIGIVGQSGNFICK
Subjt:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK

Query:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK
        TALFLTVIGVLLFRQSED+ENLRNIAEEATFYDKQWQSSWQK
Subjt:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK

A0A5D3CYT8 Chlorophyll A-B binding protein

9.0e-120

92.15

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Query:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVA-SAVVKVEEDNNDDWNNNGERFTDKRWKN
        M+SIAISASLPRA+N NHVSMKKKQ+  HLAKP YSS TKNPTPKVISTLDVGNRDDGA QQ  H RGNVA SAVVKVEED NDDWNNNGERFTDKRWKN
Subjt:  MSSIAISASLPRASNSNHVSMKKKQR-VHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQ--HRRGNVA-SAVVKVEEDNNDDWNNNGERFTDKRWKN

Query:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK
        GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLE+HPEAATN+EPV+FRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGY VDALTGIGIVGQSGNFICK
Subjt:  GTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICK

Query:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK
        TALFLTVIGVLLFRQSED+ENLRNIAEEATFYDKQWQSSWQK
Subjt:  TALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQK

A0A6J1E3P1 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.4e-91

75.11

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISAS PR+  SNHVS K+++R   A+P YSS TKNPTP++I T  VG+R D      R GNVASA  K+EED +D   N+G+ FTD+RWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFVKNGKMDWEGVIV EAKRRKFLE++PE ATN EPV+FRSSIIPWW WLTKSYLPQAELLNGRAAMIGFFM Y VDALTGIGIVGQSGNFI K ALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        +TVIGVLLFRQ++DIE LR +AEEATFYDKQWQ+SWQ
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

A0A6J1JAE2 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.7e-94

76.37

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Query:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD
        M+SIAISAS  R+  SNHVS KK+Q    A+P YSS TKNPTP++I T DVGNRD       R GNVASA  K+EED +D   N+G+ FTD+RWKNGTWD
Subjt:  MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWD

Query:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF
        LNMFVKNGKMDWEGVIV EAKRRKFLE++PE ATNQEPV+FRSSIIPWW WLTKSYLPQAELLNGRAAMIGFFM Y VDALTGIGIVGQSGNFI K ALF
Subjt:  LNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALF

Query:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        +TVIGVLLFRQ++DIE LR +AEEATFYDKQWQ+SWQ
Subjt:  LTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

1.3e-51

44.12

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Query:  SSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDL
        SS+     +P+ S S  +S K+   + + +    + T +P  ++     V   ++  V+     + AS    V  +  D       ++ + +W NGTWDL
Subjt:  SSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDL

Query:  NMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFL
          F K+GK DW+ VIV EAKRRK+LE +PE  +N E VVF +SIIPWW W+ + +LP+AELLNGRAAMIGFFM Y VD+LTG+G+V Q GNF CKT LF+
Subjt:  NMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFL

Query:  TVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKP
         V GVL  R++ED++ L+++ +E T YDKQWQ++W++P
Subjt:  TVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKP

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

3.7e-54

54.44

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Query:  AVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYL
        AV++       +  V+ EE    +   +  +F D RW NGTWDL  F K+GK DW+ VIV EAKRRK+LE +PE  +N EPV+F +SIIPWW W+ + +L
Subjt:  AVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYL

Query:  PQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        P+AELLNGRAAMIGFFM Y VD+LTG+G+V Q GNF CKT LF+ V GVL  R++ED++ L+N+ +E T YDKQWQ++W+
Subjt:  PQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

2.6e-55

54.44

Show/hide

Query:  AVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYL
        AV++       +  V+ EE    +   +  +F D RW NGTWDL  F K+GK DW+ VIV EAKRRK+LE +PE  +N EPV+F +SIIPWW W+ + +L
Subjt:  AVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDLNMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYL

Query:  PQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ
        P+AELLNGRAAMIGFFM Y VD+LTG+G+V Q GNF CKT LF+ V GVL  R++ED++ L+N+ +E T YDKQWQ++W+
Subjt:  PQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ

AT5G47110.1 Chlorophyll A-B binding family protein

9.4e-53

44.12

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Query:  SSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDL
        SS+     +P+ S S  +S K+   + + +    + T +P  ++     V   ++  V+     + AS    V  +  D       ++ + +W NGTWDL
Subjt:  SSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDL

Query:  NMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFL
          F K+GK DW+ VIV EAKRRK+LE +PE  +N E VVF +SIIPWW W+ + +LP+AELLNGRAAMIGFFM Y VD+LTG+G+V Q GNF CKT LF+
Subjt:  NMFVKNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFL

Query:  TVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKP
         V GVL  R++ED++ L+++ +E T YDKQWQ++W++P
Subjt:  TVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCAATTGCTATCTCTGCCTCATTGCCAAGAGCATCCAATTCAAATCATGTCTCTATGAAGAAAAAACAACGTGTTCATCTAGCTAAACCCGGCTATTCC
TCAACGACAAAAAACCCAACACCAAAGGTAATTAGTACTCTTGATGTCGGGAACCGAGACGATGGCGCTGTGCAGCAGCATCGTCGTGGAAATGTTGCATCAGCT
GTGGTTAAGGTAGAGGAAGATAATAATGATGATTGGAATAACAATGGTGAAAGATTCACTGATAAGAGATGGAAAAATGGAACTTGGGATCTCAATATGTTTGTA
AAGAATGGTAAGATGGATTGGGAAGGTGTCATTGTTGAAGAAGCAAAGAGGAGGAAGTTTCTTGAAATACATCCAGAAGCAGCTACAAATCAAGAACCTGTGGTC
TTTAGAAGCTCCATTATACCTTGGTGGGTATGGCTCACCAAGTCCTACCTTCCACAAGCCGAACTACTTAATGGTAGGGCAGCCATGATAGGGTTCTTCATGGGG
TATGCAGTGGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGGAATTTCATATGCAAAACAGCTCTTTTTTTAACTGTCATTGGTGTGTTGCTGTTTAGG
CAAAGTGAAGATATTGAGAACTTAAGGAATATAGCTGAAGAAGCCACCTTTTATGACAAGCAATGGCAATCTTCATGGCAAAAACCAAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVGNRDDGAVQQHRRGNVASAVVKVEEDNNDDWNNNGERFTDKRWKNGTWDLNMFV
KNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGIGIVGQSGNFICKTALFLTVIGVLLFR
QSEDIENLRNIAEEATFYDKQWQSSWQKPK

Chy7G141900 (gene) of Cucumber (hystrix) v1 genome