; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy9G160480 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy9G160480
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRNA exonuclease 4
Genome locationchrH09:2883468..2887577
RNA-Seq ExpressionChy9G160480
SyntenyChy9G160480
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]2.45e-22896.83Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        SGAIAL CKYVGGGSDGS+DICAKVCLIDEGENVIFYSYVKP+ AVTNYRYETTGIRPEHIRDAMP+KQVQKK QEILYNGGEKARILVG  VEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRS VHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

XP_022134351.1 RNA exonuclease 4 isoform X1 [Momordica charantia]9.49e-20585.71Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        +G +AL CKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKPII VTNYR+ETTGIRPEH+RDAMP+KQVQKK QEILYNGGEKAR+LVGHGVEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRS VH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

XP_022134352.1 RNA exonuclease 4 isoform X2 [Momordica charantia]1.06e-20485.71Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        +G +AL CKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKPII VTNYR+ETTGIRPEH+RDAMP+KQVQKK QEILYNGGEKAR+LVGHGVEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRS VH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]3.59e-20787.3Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        SG +AL CKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKPII VTNYRYE TGIRPEH+RDAMP+KQVQKK Q+ILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRS VHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]1.78e-20787.3Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        SG +AL CKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP I VTNYRYETTGIRPEH+RDAMP+KQVQKK Q+ILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRS VHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 41.4e-14978.09Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGST+IDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGE----------KARILVG
        SGAIAL CKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKPII VTNYRYE TG+RPEH+RDAMP+KQVQKK QE L NG +          KARILVG
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGE----------KARILVG

Query:  HGVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWREN
        HG+++ L  LQI YPS MIRDTA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M+S VH++E YP+ASDP NK NFAIW++ 
Subjt:  HGVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        EL++M+P+Q+L+ISRSDYYCWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

A0A6J1BXL4 RNA exonuclease 41.3e-16185.71Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        +G +AL CKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKPII VTNYR+ETTGIRPEH+RDAMP+KQVQKK QEILYNGGEKAR+LVGHGVEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRS VH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1BZE0 RNA exonuclease 41.3e-16185.71Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        +G +AL CKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKPII VTNYR+ETTGIRPEH+RDAMP+KQVQKK QEILYNGGEKAR+LVGHGVEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRS VH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        +ISRSDYYCWC+DLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1FEK0 RNA exonuclease 41.8e-16387.3Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        SG +AL CKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKPII VTNYRYE TGIRPEH+RDAMP+KQVQKK Q+ILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRS VHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

A0A6J1JZ30 RNA exonuclease 41.0e-16387.3Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL
        SG +AL CKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP I VTNYRYETTGIRPEH+RDAMP+KQVQKK Q+ILYNGGEKAR+LVGH VEDDLKRL
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRS VHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLR
        EISRSDYYCWCMDLR
Subjt:  EISRSDYYCWCMDLR

SwissProt top hitse value%identityAlignment
Q4WHF8 RNA exonuclease 43.5e-2033.88Show/hide
Query:  IALVCKYVGGGSDGSVD-ICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQI
        +A+ C+ VG G +   D   A+V +++     ++ SYV+P   +T++R   +GI P+H+ +A  ++QVQK   EIL       RILVGH V +DL  L +
Subjt:  IALVCKYVGGGSDGSVD-ICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQI

Query:  GYPSFMIRDTANYPPLMK-SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRK--ENYPMASDPQNKNN
        G+P   IRDT+ +PP  K +      LK LA  +LG ++Q+G     E+    M LY+R +    R+  + +P+      K N
Subjt:  GYPSFMIRDTANYPPLMK-SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRK--ENYPMASDPQNKNN

Q6CMT3 RNA exonuclease 46.1e-2035.54Show/hide
Query:  RTRGSGA-IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVED
        RT G G  +++ C++VG G DG     A+V +++   NV+   +V+P   VT++R   +GI+P H+ +A+  +  QK+   +L     K RILVGH V  
Subjt:  RTRGSGA-IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK
        DL  L + +P  MIRDT+ + P  +  S     SLK L +  L  D+Q+G     E+    M LYK
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK

Q6FQA0 RNA exonuclease 43.5e-2034.5Show/hide
Query:  IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIG
        IA+ C++VG G +G     A+V L++   NV+   +VKP   VT++R   +GI P+H+++A+  KQ Q++  +IL     K +ILVGH V+ DL+ L + 
Subjt:  IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIG

Query:  YPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPV---HRKE
        +P   + DTA + P  +  +     SLK LA+  L  D+Q+G     E+    M +YK  +      HRK+
Subjt:  YPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPV---HRKE

Q91560 RNA exonuclease 41.4e-2139.1Show/hide
Query:  IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIG
        +A+ C+ VG G DG   I A+V +++     ++  YVKP   VT+YR   +GIRPE ++   P K VQK+  EIL     + R LVGH V +DLK L + 
Subjt:  IALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIG

Query:  YPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY
        +P   IRDT  Y P  +  K    SLK L +  L   +Q G     ++   AMRLY
Subjt:  YPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY

Q9GZR2 RNA exonuclease 47.1e-2134.34Show/hide
Query:  LGIRDGSTVIDSGRTRGSG----AIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILY
        LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V ++++    ++  YVKP   VT+YR   +GIRPE+++    ++ VQK+  E+L 
Subjt:  LGIRDGSTVIDSGRTRGSG----AIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILY

Query:  NGGEKARILVGHGVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASD
            K RILVGH + +DLK L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY  +     +KE   MA D
Subjt:  NGGEKARILVGHGVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASD

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein2.2e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P++ VT+YR+E TG+  E ++D MP++ V+++    L    N G    +LVGH +  
Subjt:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR   H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.2 Exonuclease family protein2.2e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P++ VT+YR+E TG+  E ++D MP++ V+++    L    N G    +LVGH +  
Subjt:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR   H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.3 Exonuclease family protein2.2e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P++ VT+YR+E TG+  E ++D MP++ V+++    L    N G    +LVGH +  
Subjt:  RGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEIL---YNGGEKARILVGHGVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR   H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT3G27970.1 Exonuclease family protein4.0e-12865.53Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        M+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQECKNIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R A LG+RD   +ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNG---------GEKARILVGH
           +AL CK VGGGSDGS+D+CA+VC+ DE +NVIF++YVKP +AVT+YRYETTGIRPE++RDAMP+KQVQ+K QE L NG         G KARILVGH
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNG---------GEKARILVGH

Query:  GVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENEL
        G++ DL RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR   H+ E YP+A+D QN++N   WR++E 
Subjt:  GVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSP++ML ISRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD

AT5G40310.1 Exonuclease family protein1.7e-12665.84Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQECKNIF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R A LG+R+ ST ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNG---------GEKARILVGH
           +AL CK VGGGSDGS+D+CA+VC+ DE ENV+F++YVKP I VTNYRYE TGIRPE++RDAM +K  Q+K QE L NG           KARILVGH
Subjt:  SGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNG---------GEKARILVGH

Query:  GVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENEL
        G+++ L  LQ+ Y S MIRDTA YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR   HR E YP+ASD QN NNFA WR+NEL
Subjt:  GVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSPE++L++SRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACTTCTTTTCACTCGCATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCA
AAACAAGAATGCAAAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTC
TCTCCTGTAAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCAACCGTGATCGACAGTGGAAGAACACGAGGGTCAGGAGCCATCGCG
CTAGTTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGGTGGACATATGTGCTAAGGTTTGCCTTATTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTC
AAGCCCATAATTGCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACACATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAAAAATTTCAA
GAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTAGGTCATGGCGTTGAAGACGATCTCAAACGCTTACAAATCGGTTACCCATCCTTCATGATAAGG
GACACAGCAAATTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAA
GATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACCAGTTCATAGGAAAGAGAACTATCCAATGGCTTCTGACCCACAAAACAAA
AATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTAAGG
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACTTCTTTTCACTCGCATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCA
AAACAAGAATGCAAAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTC
TCTCCTGTAAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCAACCGTGATCGACAGTGGAAGAACACGAGGGTCAGGAGCCATCGCG
CTAGTTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGGTGGACATATGTGCTAAGGTTTGCCTTATTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTC
AAGCCCATAATTGCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACACATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAAAAATTTCAA
GAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTAGGTCATGGCGTTGAAGACGATCTCAAACGCTTACAAATCGGTTACCCATCCTTCATGATAAGG
GACACAGCAAATTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAA
GATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACCAGTTCATAGGAAAGAGAACTATCCAATGGCTTCTGACCCACAAAACAAA
AATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTAAGG
AATTGA
Protein sequenceShow/hide protein sequence
MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRGSGAIA
LVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIGYPSFMIR
DTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
N