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Chy9G160930 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy9G160930
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Genome locationchrH09:3295601..3296127
RNA-Seq ExpressionChy9G160930
SyntenyChy9G160930
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039890.1 putative G3BP-like protein [Cucumis melo var. makuwa]1.98e-0969.23Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDG+DY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
TYK24612.1 putative G3BP-like protein [Cucumis melo var. makuwa]1.97e-0969.23Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDG+DY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
XP_008459963.1 PREDICTED: putative G3BP-like protein [Cucumis melo]7.68e-1071.15Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDGSDY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
XP_022954300.1 putative G3BP-like protein isoform X1 [Cucurbita moschata]6.80e-0967.31Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGS+QSDAPRGRFGS +LGRGSSQDGSDY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
XP_038874349.1 nuclear transport factor 2 [Benincasa hispida]2.67e-0969.23Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQS+APRGRFGS SLGRGSSQDGSDY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
TrEMBL top hitse value%identityAlignment
A0A0A0L7V2 Uncharacterized protein7.8e-0794.12Show/hide
Query:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        GR RGRGSYQ DAPRGRFGSHSLGRGSSQDGSDY
Subjt:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
A0A1S3CBV7 putative G3BP-like protein2.1e-0771.15Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDGSDY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
A0A5A7T9E4 Putative G3BP-like protein4.6e-0769.23Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDG+DY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
A0A5D3DM71 Putative G3BP-like protein4.6e-0769.23Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGSYQSDAPRGRFGS SLGRGSSQDG+DY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
A0A6J1GS17 putative G3BP-like protein isoform X11.3e-0667.31Show/hide
Query:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        Q++  +   N + A G G RGRGRGS+QSDAPRGRFGS +LGRGSSQDGSDY
Subjt:  QLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain2.7e-0464.71Show/hide
Query:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        G GRGRG Y ++APRGRFG    GRG +QDG DY
Subjt:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
AT5G43960.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain2.7e-0464.71Show/hide
Query:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
        G GRGRG Y ++APRGRFG    GRG +QDG DY
Subjt:  GRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGACTACCAATGTCGCCAAACAACTCGGCTTCTACCACACAATGTTTAGCGGCGTTGGAGGTTTTGGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCC
TCATCGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGATACCGTTCAGCTCCATAAGACCCAATTGCCGACTAACATCGCGGAAGCAGAAGGT
GAAGGTGGAAGGGGAAGAGGGAGAGGTAGTTATCAGTCAGATGCTCCGAGGGGACGGTTTGGTTCTCATAGTTTGGGTCGAGGAAGCAGCCAGGATGGAAGCGAC
TATG
mRNA sequenceShow/hide mRNA sequence
TTGGACTACCAATGTCGCCAAACAACTCGGCTTCTACCACACAATGTTTAGCGGCGTTGGAGGTTTTGGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCC
TCATCGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGATACCGTTCAGCTCCATAAGACCCAATTGCCGACTAACATCGCGGAAGCAGAAGGT
GAAGGTGGAAGGGGAAGAGGGAGAGGTAGTTATCAGTCAGATGCTCCGAGGGGACGGTTTGGTTCTCATAGTTTGGGTCGAGGAAGCAGCCAGGATGGAAGCGAC
TATG
Protein sequenceShow/hide protein sequence
LDYQCRQTTRLLPHNVRRWRFWPSLLCLSLAQPSSSERRRPRLSLSDFKEDTVQLHKTQLPTNIAEAEGEGGRGRGRGSYQSDAPRGRFGSHSLGRGSSQDGSDY
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