; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy9G166080 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy9G166080
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationchrH09:11697394..11698228
RNA-Seq ExpressionChy9G166080
SyntenyChy9G166080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]7.38e-8381.05Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ KKRDDHK LSRSNTLKDLFVSSPPY  +D +++ET   AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
         RNVTPVC +E  +G +G  GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

XP_008467191.1 PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo]2.20e-10194.84Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        APT+N TPVCEKEKEEG VGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVL+GIP+
Subjt:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

XP_011655483.1 uncharacterized protein LOC105435544 [Cucumis sativus]4.49e-10596.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVTAP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVL+GIP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]4.46e-8481.05Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ KKRDDHK LSRSNTLKDLFVSSPPY  ++C+++ET   AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
         RNVTPVC +E  +G +G  GW+PGSPRPGWTGFRYKYLLRKTWRP+L GIP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

XP_038875200.1 uncharacterized protein LOC120067717 [Benincasa hispida]6.37e-9188.89Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP RR+LPE KKRDDHK LSRSNTLKDLFVSSPPYV TD D+HETAV AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        TR+ T VC KEKE+G VGS GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein7.7e-8096.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENK RDD KGLSRSNTLKDLFVSSPPY+GTDCDVH+TAVTAP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVL+GIP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

A0A1S3CSY3 uncharacterized protein LOC1035045994.7e-7794.84Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        APT+N TPVCEKEKEEG VGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVL+GIP+
Subjt:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

A0A5D3BMD8 Uncharacterized protein4.7e-7794.84Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR R+LPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVT

Query:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        APT+N TPVCEKEKEEG VGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVL+GIP+
Subjt:  APTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

A0A6J1DFV6 uncharacterized protein LOC1110200645.2e-6079.87Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTA-
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LP+ K+  DH  L+RSNTLKDLFVSSPPY G D ++ E A TA 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTA-

Query:  PTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
         + N+ PVC KEKE+G VGS GW PGSPRP WTGFRYKYLLRKTWRPVL GIP+
Subjt:  PTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

A0A6J1HGM7 uncharacterized protein LOC1114633736.1e-6179.08Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRR+LP+ KKRDDHK LSRSNTLKDLFVSSPPY  +D +++ET   AP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAP

Query:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
         RNVTPVC   +E+G +G   W+PGSPRPGWTGFR+KYLLRKTWRP+L  IP+
Subjt:  TRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown5.0e-1543.9Show/hide
Query:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRSLPENKKRDDHKGLSRSNTLKDLFVSSPPY----------VGTD
        SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLTR+S R R P  + ++ E+KK D    +  S  L DLFVSSPP+           GT 
Subjt:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRSLPENKKRDDHKGLSRSNTLKDLFVSSPPY----------VGTD

Query:  CDVHETAVTAPTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
         +V E     P   V+       EE      G+N GS RP  +      LLR++WRPVL+ IP+
Subjt:  CDVHETAVTAPTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD

AT1G68430.1 unknown protein2.2e-1038.36Show/hide
Query:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAV
        MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+  S  R  ++  +  +     HK ++    LKDLFVSS            +A 
Subjt:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAV

Query:  TAPTRNVTPVCEKEKEEGHVGSPGWNPGS--------PRPGWTGFRYKYLLRKTWRPVL
             +  P  + ++E     +   N  S          P W GF  K LL++ WRP L
Subjt:  TAPTRNVTPVCEKEKEEGHVGSPGWNPGS--------PRPGWTGFRYKYLLRKTWRPVL

AT5G16200.1 50S ribosomal protein-related1.7e-1035.26Show/hide
Query:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPE----------NKKRDDHKGLSRSNTLKDLFVS--SPP
        ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  R    R + E          NKKR +H+   R   L++L V+  SPP
Subjt:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPE----------NKKRDDHKGLSRSNTLKDLFVS--SPP

Query:  YVGTDCDV----HETAVTAPTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD
        Y G + D+     E +  +P    +    +E      GS G            FR + +LRK WRPVL+ IP+
Subjt:  YVGTDCDV----HETAVTAPTRNVTPVCEKEKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGGGTCGCTCAGAGTCCTACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGTCGGAAAAC
CACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGTCGCCGCTCCTTACCGGAGAATAAGAAGAGAGACGACCATAAGGGTTTGTCGCGGAGTAACA
CGTTGAAGGATTTGTTCGTTTCGTCGCCACCGTATGTTGGAACTGACTGTGATGTTCACGAGACGGCGGTCACGGCTCCAACCCGGAACGTAACTCCAGTTTGTGAGAAG
GAGAAGGAGGAAGGTCACGTTGGATCACCCGGTTGGAATCCCGGTTCCCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGT
GCTCCTCGGAATCCCCGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGGGTCGCTCAGAGTCCTACTTTAAGCCCTAGGACCAGTCCTCTCGTTCACCTCCGCCGTCGGAAAAC
CACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGTCGCCGCTCCTTACCGGAGAATAAGAAGAGAGACGACCATAAGGGTTTGTCGCGGAGTAACA
CGTTGAAGGATTTGTTCGTTTCGTCGCCACCGTATGTTGGAACTGACTGTGATGTTCACGAGACGGCGGTCACGGCTCCAACCCGGAACGTAACTCCAGTTTGTGAGAAG
GAGAAGGAGGAAGGTCACGTTGGATCACCCGGTTGGAATCCCGGTTCCCCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGT
GCTCCTCGGAATCCCCGATTTATGA
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTRNVTPVCEK
EKEEGHVGSPGWNPGSPRPGWTGFRYKYLLRKTWRPVLLGIPDL