; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy9G171900 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy9G171900
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationchrH09:16155610..16161326
RNA-Seq ExpressionChy9G171900
SyntenyChy9G171900
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654574.2 serine/arginine-rich splicing factor SR34A [Cucumis sativus]7.85e-15784.97Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG  
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGG------------------------GGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYD
               GGG                        GGGG GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYD
Subjt:  AGGGGGGGGG------------------------GGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYD

Query:  DMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSR------------TARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSR
        DMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSR            TARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSR
Subjt:  DMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSR------------TARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSR

Query:  SGSPRQ
        SGSPRQ
Subjt:  SGSPRQ

XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]1.39e-16294.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG  
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRS----RTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKYDGSPTRSRSRSRSRSRSRSRS    R+ARRNRSKS ER SVSRSVSRSRSPSP+KSSRPRSKSRSGSPR+
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRS----RTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

XP_022974340.1 serine/arginine-rich splicing factor SR34A-like isoform X1 [Cucurbita maxima]2.44e-14884.25Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGG-RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
         GGGGGGGGGGGGGGGGG RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YI
Subjt:  AGGGGGGGGGGGGGGGGG-RFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDGSPTRSRSRSRSRS-----------------------------------RSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS
        RVKKYDGSPTRSRSRSRSRS                                   RSRSRSR+AR NRSKSAER SVSRSVSRSRSPSP+KS
Subjt:  RVKKYDGSPTRSRSRSRSRS-----------------------------------RSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS

XP_023533518.1 serine/arginine-rich splicing factor SR34A-like isoform X2 [Cucurbita pepo subsp. pepo]1.03e-14987.68Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+YGG   
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
                GGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTR------SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKY+GSPTR      SRSRSRSRSRSRSRSR+ARRNRSKSAE+ SVSRSVSRSRS SP+KSSR RSKSRSGSPR+
Subjt:  VKKYDGSPTR------SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

XP_038907230.1 serine/arginine-rich splicing factor SR34A [Benincasa hispida]1.20e-15789.44Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG  
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
               G GGGGG GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA+RKLDDTEFRNPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRT--------------ARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKYDGSPTRSRSRSRSRSRSRSRSR+              ARRNRSKSAER SVSRSVSRSRSPSP+KSSRPRSKSRSGSPRQ
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRT--------------ARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein8.0e-13397.1Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPT------RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKYDGSPT      RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
Subjt:  VKKYDGSPT------RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A1.3e-12794.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGG  
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSR----SRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKYDGSPTRSRSRSRSRSRSR    SRSR+ARRNRSKS E RSVSRSVSRSRSPSP+KSSRPRSKSRSGSPR+
Subjt:  VKKYDGSPTRSRSRSRSRSRSR----SRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

A0A6J1H330 serine/arginine-rich splicing factor SR34A-like8.9e-11686.4Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
                  GG GGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPT--RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKY+GSPT  RSR+RSRSRSRSRSRSR+ RRNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+
Subjt:  VKKYDGSPT--RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

A0A6J1IB34 serine/arginine-rich splicing factor SR34A-like isoform X16.1e-11784.25Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGA
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGA

Query:  GAGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
        G GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YI
Subjt:  GAGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDGSPTRSRSR-----------------------------------SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS
        RVKKYDGSPTRSRSR                                   SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSP+KS
Subjt:  RVKKYDGSPTRSRSR-----------------------------------SRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS

A0A6J1K1U7 serine/arginine-rich splicing factor SR34A-like1.5e-11584.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
                  GG GGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPT--------RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        VKKY+GSPT        RSRSRSRSRSRSRSRSR+A+RNRSKSAE +SVSRSVSRSRS SP+KSSR RSKSRSGSPR+
Subjt:  VKKYDGSPT--------RSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A9.2e-10273.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS
        VKKY+ S +RSRS SRSRSRSRSRSR+  R RS S                 + RRS+SRS+S+SRSPSP K   P     RSKSRS S
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS

F4JHI7 Serine/arginine-rich splicing factor SR34B6.9e-7363.31Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSR SRTIYVGNLP DI+E E+EDLF KYG ++ I+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDG  LRVELAHGGR  SS D R SY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
           G G GG GGG GGG   G S+RSEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT GIVDYT+Y+DMKYA   LDDTEFRN ++  Y+R
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDG-----SPTR----SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPR
        V++YD      SP+R    S+SRSR RS SRSRSR+  R++S+S + +S+ RS ++S S SP   SR RSKSRS SPR
Subjt:  VKKYDG-----SPTR----SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPR

O22315 Serine/arginine-rich-splicing factor SR341.7e-7662.18Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
            GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+R
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        V++YD      SP+R RS S+SRSRSR RS +  R+RS+S  R   ++S  RS + S  +S  PRSKSRS SPR+
Subjt:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

Q6DII2 Serine/arginine-rich splicing factor 15.8e-5659.22Show/hide
Query:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAGAGGGGGGG
        IYVGNLP DI+  +IED+FYKYG I DI+LK     P + FVEFE  RDAEDA+  RDGY++DG RLRVE    GRG  +  R    GGG G GGGGGGG
Subjt:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAGAGGGGGGG

Query:  GGGGGGGGG----GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVK
        GGGGGGGGG    GR+G  S+RSEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+FR +    AYIRVK
Subjt:  GGGGGGGGG----GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVK

Query:  -------KYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRS
                Y  S +RSRSRSRSRSRS SRSR+    RS+ + R S   S SRSR+
Subjt:  -------KYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRS

Q9XFR5 Serine/arginine-rich splicing factor SR306.6e-6858.16Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG
        MSSR++RTIYVGNLP DI++ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDGCRLRVE+AHGGR   PS     SSY   
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG

Query:  AGAGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAY
                                S+RS+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEFRN ++ AY
Subjt:  AGAGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAY

Query:  IRVKKYDG-----SPTRSRS-RSRSRSRS-----RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS-SRPRSKSRSGSP
        IRV++Y+      SP  S+S RSRSRSR       S+SR+    RS S   R +SRS S   S S  +S S+ RS+SRS SP
Subjt:  IRVKKYDG-----SPTRSRS-RSRSRSRS-----RSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKS-SRPRSKSRSGSP

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-7762.18Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
            GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+R
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        V++YD      SP+R RS S+SRSRSR RS +  R+RS+S  R   ++S  RS + S  +S  PRSKSRS SPR+
Subjt:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

AT1G02840.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-7762.18Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
            GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+R
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ
        V++YD      SP+R RS S+SRSRSR RS +  R+RS+S  R   ++S  RS + S  +S  PRSKSRS SPR+
Subjt:  VKKYDG-----SPTRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ

AT3G49430.1 SER/ARG-rich protein 34A6.5e-10373.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS
        VKKY+ S +RSRS SRSRSRSRSRSR+  R RS S                 + RRS+SRS+S+SRSPSP K   P     RSKSRS S
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS

AT3G49430.2 SER/ARG-rich protein 34A2.5e-10274.28Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP
        VKKY+ S +RSRS SRSRSRSRSRSR+  R RS S                 + RRS+SRS+S+SRSPSP K   P
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP

AT3G49430.3 SER/ARG-rich protein 34A6.5e-10373.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAG

Query:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
         GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IR
Subjt:  AGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS
        VKKY+ S +RSRS SRSRSRSRSRSR+  R RS S                 + RRS+SRS+S+SRSPSP K   P     RSKSRS S
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRTARRNRSKS-----------------AERRSVSRSVSRSRSPSPIKSSRP-----RSKSRSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGATATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGCTGGTGCTGGTGGAGGAGGAGGAGGAGGAGGAGGC
GGAGGAGGGGGAGGAGGGGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCATCTTCTGCTTCTTGGCAGGATTTGAAGGATCA
TATGCGCAAGGCGGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAA
AACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGGAGTAGAAGCCGT
AGCCGTAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAGATCAAGATCTCCATCTCCTATTAAATCTTC
AAGGCCACGGTCAAAATCAAGATCTGGATCACCACGTCAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGATATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGCTGGTGCTGGTGGAGGAGGAGGAGGAGGAGGAGGC
GGAGGAGGGGGAGGAGGGGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCATCTTCTGCTTCTTGGCAGGATTTGAAGGATCA
TATGCGCAAGGCGGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAA
AACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGGAGTAGAAGCCGT
AGCCGTAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAGATCAAGATCTCCATCTCCTATTAAATCTTC
AAGGCCACGGTCAAAATCAAGATCTGGATCACCACGTCAG
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGAGAGGGGGGGGG
GGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSR
SRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPIKSSRPRSKSRSGSPRQ