; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ChyUNG226560 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG226560
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionExopolygalacturonase-like
Genome locationscaffold25_size3045174:994563..995763
RNA-Seq ExpressionChyUNG226560
SyntenyChyUNG226560
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059116.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.05e-13386.05Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YGN VSG DVT+ALKDAWNDACA + PSAVVIPKG FKVREGEFKGPC+SPI++RVRGTL APKHPHGDSWITFAYVDRMTLSG G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHKRI CA LPISLRF+FITNSI+RRITSLDSKNFHVNIL CNNLTF GVNII  EDSPN DGIHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGK
        TCGPGH ISIGSLGK
Subjt:  TCGPGHEISIGSLGK

XP_031741749.1 exopolygalacturonase-like [Cucumis sativus]1.42e-13678.17Show/hide
Query:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP
        MGVIKYSNLL                           YGN VSG DVT+ALK+AWNDACA VHPSAVVIPKGIFKVREG+FKGPC+SPI+IRVRGTL AP
Subjt:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP

Query:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG
        KHP+GDSWITFAYVDRMTLSG G+FD QGK GWEKNDCHKRIDCANLPISLRFDFITNSI+RRITSL+SKNFHVNIL CNNLTFQGVNII  EDSPN DG
Subjt:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG

Query:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK
        IHIGRSIGISILKS+I TG+ CISLGDGSK+VKV +VTCGPGH ISIGSLGK
Subjt:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK

XP_031742281.1 exopolygalacturonase-like [Cucumis sativus]9.45e-14079.76Show/hide
Query:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP
        MGVIKYSNLL                           YGN VSG DVT+ALKDAWNDACA V PSAVVIPKGIFKVREGEFKGPC+SPI+IRVRGTL AP
Subjt:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP

Query:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG
        KHPHGDSWITFAYVDRMTLSG G+FD QGKAGWEKNDCHKRIDCANLPISLRFDFITNSI++RITSLDSKNFHVNIL CNNLTF+GVNII  EDSPN DG
Subjt:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG

Query:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK
        IHIGRSIGISILKSQI TG+ CISLGDGSKRVK+T+VTCGPGH ISIGSLGK
Subjt:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK

XP_031744645.1 LOW QUALITY PROTEIN: exopolygalacturonase [Cucumis sativus]3.41e-13577.38Show/hide
Query:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP
        MG+IKYSNLL                           YGN VSG DVT+ALKDAWNDACA V PSAVVI  GIFK+REGEFKGPC+SPI+IRVRGTL AP
Subjt:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP

Query:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG
        KHPHGDSWITFAYVDRMT+SG+G+FD QGKAGWEKNDCHKRIDC NLPISLRFDFITNSI+R ITSLDSKNFHVNIL CNNLTFQGVNII  EDSPN DG
Subjt:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG

Query:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK
        IHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+VTCGPGH ISIGSLGK
Subjt:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK

XP_031745268.1 exopolygalacturonase-like [Cucumis sativus]1.03e-13678.17Show/hide
Query:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP
        MG+IKYSNL                            YGN VSG DVT+ALKDAWNDACA V PSAVVIP GIFKVREGEFKGPC+SPI+IRVRGTL AP
Subjt:  MGVIKYSNLL---------------------------YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP

Query:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG
        KHPHGDSWITFAYVDRMT+SG+G+FD QGKAGWEKNDCHKRIDCANLPISLRFDFITNSI+R ITSLDSKNFHVNIL CNNLTFQGVNII  EDSPN DG
Subjt:  KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDG

Query:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK
        IHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+VTCGPGH ISIGSLGK
Subjt:  IHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGHEISIGSLGK

TrEMBL top hitse value%identityAlignment
A0A0A0K3B7 Uncharacterized protein3.1e-10485.12Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YGN VSG DVT+ALKDAWNDACA   PSAVVIPKG FKVREGEFKGPC+SPI+ RV GTL APKHPHGDSWITFAYVDRM LSG G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHKRIDCA LPISLRFDFITNSI+RRITSLDSKNFHVNIL CNNLTFQGVNII  E+SPN DGIHIGRSIGISILKS+I TG+ CISLGDGSKR+KV +V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGK
         CGPGH ISIGSLGK
Subjt:  TCGPGHEISIGSLGK

A0A1S3C2F4 exopolygalacturonase-like1.2e-10585.12Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YGN VSG DVT+ALKDAWNDACA + PSAVVIPKG FKVREGEFKGPC+SP+++RVRGTL APKHPHGDSWITFAYVDRMTLSG G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHK I CA LPISLRF+FITNSI+RRITSLDSKNFHVNIL CNNLTF GVNII  EDSPN DGIHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGK
        TCGPGH ISIGSLGK
Subjt:  TCGPGHEISIGSLGK

A0A5A7UY44 Exopolygalacturonase-like3.3e-10686.05Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YGN VSG DVT+ALKDAWNDACA + PSAVVIPKG FKVREGEFKGPC+SPI++RVRGTL APKHPHGDSWITFAYVDRMTLSG G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHKRI CA LPISLRF+FITNSI+RRITSLDSKNFHVNIL CNNLTF GVNII  EDSPN DGIHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGK
        TCGPGH ISIGSLGK
Subjt:  TCGPGHEISIGSLGK

A0A5D3DD75 Exopolygalacturonase-like1.2e-10585.12Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YGN VSG DVT+ALKDAWNDACA + PSAVVIPKG FKVREGEFKGPC+SP+++RVRGTL APKHPHGDSWITFAYVDRMTLSG G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHK I CA LPISLRF+FITNSI+RRITSLDSKNFHVNIL CNNLTF GVNII  EDSPN DGIHIGRSIGISILKS+I TG+ CISLGDGSKRVK+T+V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGK
        TCGPGH ISIGSLGK
Subjt:  TCGPGHEISIGSLGK

A0A6J1C2C8 exopolygalacturonase-like4.1e-9373.09Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND
        YG  VSG DV++AL +AW DACA V PSAVVIP+GIFKV +G F+GPC+S I+ R+RGTL AP HP G+SWITFAY+DR+TL G G+FD QGKAGWEKND
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKND

Query:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
        CHK I+CA LPISLRFDFITNS ++RITSLDSK+FHVNIL CNNLTF GVNII  EDSPN DGIHIGRS GI+I KS+I TG+ CISLGDGSKR+KVT+V
Subjt:  CHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV

Query:  TCGPGHEISIGSLGKSLMKNMLK
        TCGPGH ISIGSLG+   +  +K
Subjt:  TCGPGHEISIGSLGKSLMKNMLK

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)4.5e-6051.18Show/hide
Query:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHP---HGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI
        D T+AL  AW +ACA   PS +++PKG F V     +GPC+S I ++++GTL AP  P    G  WI    +D +T+ G G+FD QGK+ W +NDCHK  
Subjt:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHP---HGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI

Query:  D-CANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP
          C  L ++LR   +TNSI+R +T+LDSKNFHVN++ C NLTF+   I   E S N DGIHIGRS G++I+ ++I TG+ CISLGDGSK + +T++TCGP
Subjt:  D-CANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP

Query:  GHEISIGSLGK
        GH IS+GSLG+
Subjt:  GHEISIGSLGK

P35337 Polygalacturonase1.3e-5445.93Show/hide
Query:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP--KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRID
        D+T A+  A+  AC    PS V+IPKG FK+ E    GPC+SPI+  ++G +          D W+ F  ++   L+G G FD +G A W+ N+CHK  +
Subjt:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP--KHPHGDSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRID

Query:  CANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGH
        C  LPIS+RFDF+ N+ ++ +TSLD+KNFH N++   N+TF  + II   +SPN DGIH+GR  G+ IL ++I TG+ CIS+GDG K + +  V CGPGH
Subjt:  CANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPGH

Query:  EISIGSLGK
         IS+GSLG+
Subjt:  EISIGSLGK

Q39766 Polygalacturonase1.4e-5848.1Show/hide
Query:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG---DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI
        D++K   DAW +ACA V PS VVIPKG + + +   +GPC++PI+I V+GT+ AP  P      +W+ F  V+   + G GIFD QG   +EKN C  R 
Subjt:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG---DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI

Query:  DCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPG
          + LP+++RFDF+TN++++ ITS DSK FH+N+  C N+T + + I   ++SPN DGIH+G+S G++I+ S I TG+ CIS+GDG+K + + ++TCGPG
Subjt:  DCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPG

Query:  HEISIGSLGK
        H ISIGSLGK
Subjt:  HEISIGSLGK

Q39786 Polygalacturonase1.9e-5848.1Show/hide
Query:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG---DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI
        D++K   DAW +ACA V PS VVIPKG + + +   +GPC++PI+I V+GT+ AP  P      +W+ F  V+   + G GIFD QG   +EKN C  R 
Subjt:  DVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG---DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKRI

Query:  DCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPG
          + LP+++RFDF+TN++++ ITS DSK FH+N+  C N+T + + I   ++SPN DGIH+G+S G++I+ S I TG+ CIS+GDG+K + + ++TCGPG
Subjt:  DCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGPG

Query:  HEISIGSLGK
        H ISIGSLGK
Subjt:  HEISIGSLGK

Q6H9K0 Exopolygalacturonase (Fragment)6.9e-5345.21Show/hide
Query:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCE-SPIKIRVRGTLHAPKHP---HGDSWITFAYVDRMTLSGRGIFDSQGKAGW
        YG   +G D+++A+  AW  ACA   PS V+IPKG + + E   +GPC+ S I  ++ G + AP  P     D W++F  +D +T+SG G  D QG+  W
Subjt:  YGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCE-SPIKIRVRGTLHAPKHP---HGDSWITFAYVDRMTLSGRGIFDSQGKAGW

Query:  EKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVK
         KN+C K  +C +  ++LRFDF+ ++++R ITSL+SK FH+N+L C ++TFQ V +     S N DGIH+G S G++I  ++I TG+ CIS+G GS+ V 
Subjt:  EKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVK

Query:  VTDVTCGPGHEISIGSLGK
        +T V CGPGH ISIGSLG+
Subjt:  VTDVTCGPGHEISIGSLGK

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein5.8e-6348.46Show/hide
Query:  MGVIKYSNLLYGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKH--PHGDSWITFAYVDRMTLSGRGIF
        +G+   + +    + SG D+T+AL  A+  AC    PS VVIPKG FK+ E E +GPC++PI++ ++GT+ A  +     + W+ F  +D   L+G G F
Subjt:  MGVIKYSNLLYGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKH--PHGDSWITFAYVDRMTLSGRGIF

Query:  DSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISL
        D +G A W  N+CHK  +C  LPIS+RFDFI NS +R I+S+D+KNFH+N+L   N+T   + I+  EDSPN DGIH+GRS G+ IL S I TG+ CIS+
Subjt:  DSQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISL

Query:  GDGSKRVKVTDVTCGPGHEISIGSLGK
        GDG K + V  VTCGPGH IS+GSLG+
Subjt:  GDGSKRVKVTDVTCGPGHEISIGSLGK

AT3G07830.1 Pectin lyase-like superfamily protein4.6e-6049.29Show/hide
Query:  GVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHP-HG-DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKR
        G D+T+AL  A+  AC    P  VVIPKG FK+ E    GPC+SP++I + GT+ A  +  HG + W+ F  +D   L+G G FD +G A W  N+CHK 
Subjt:  GVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHP-HG-DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKR

Query:  IDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP
         +C  LPIS+RFDF+TN+ +R I+S+D+KNFH+N++   N+TF  V I+   +SPN DGIH+GRS+G+SI+ S+I TG+ C+S+GDG   + V +V CGP
Subjt:  IDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP

Query:  GHEISIGSLGK
        GH IS+GSLG+
Subjt:  GHEISIGSLGK

AT3G07840.1 Pectin lyase-like superfamily protein7.8e-6050.24Show/hide
Query:  GVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP-KHPHG-DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKR
        G D+T+AL  A+  AC     S VVI KG FK+ E E  GPC++P++I ++GTL A  K   G + W+ F  ++   L+G GIFD +G A W  N+CHK 
Subjt:  GVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP-KHPHG-DSWITFAYVDRMTLSGRGIFDSQGKAGWEKNDCHKR

Query:  IDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP
         +C  LPIS+RFDF+ N+ +R I+S+D+KNFH+N+L   N+TF  V +I   +SPN DGIH+GRS G+ IL S+I TG+ CIS+GDG K + V +V CGP
Subjt:  IDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDVTCGP

Query:  GHEISIGSLGK
        GH IS+GSLG+
Subjt:  GHEISIGSLGK

AT3G07850.1 Pectin lyase-like superfamily protein9.5e-5044.91Show/hide
Query:  SGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP-----KHPHGDSWITFAYVDRMTLSG-RGIFDSQGKAGWEKN
        S  D + A   AW +ACA    S + +PKG + V   EFKGPC+ P+ + + G   AP       PH   WI F  +   TL+G + IFD QG   W+ N
Subjt:  SGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAP-----KHPHGDSWITFAYVDRMTLSG-RGIFDSQGKAGWEKN

Query:  DCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTD
        DC K   C +LPI++RF  +TNS +  ITS +SK FH+NIL C N+T   + I    +S N DGIHIGRS G++++ ++I TG+ C+S+GDG++ + V +
Subjt:  DCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTD

Query:  VTCGPGHEISIGSLGK
        V CGPGH ISIGSLG+
Subjt:  VTCGPGHEISIGSLGK

AT5G48140.1 Pectin lyase-like superfamily protein1.4e-6147.35Show/hide
Query:  MGVIKYSNLLYGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG-DSWITFAYVDRMTLSGRGIFD
        +G+   + +   N+  G D+T AL  A+N+AC +   S V+IPKG +K+ E    GPC++PI+I + GT+ A  + +G + W+ F  ++   L+G G+FD
Subjt:  MGVIKYSNLLYGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHG-DSWITFAYVDRMTLSGRGIFD

Query:  SQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLG
         +G A W  N+CHK  +C  LPIS+RFDF+T++ +R ITSLD+K+FH+N++   N+TF+ V II   +SPN DGIH+GRS GI I+ S I TG+ C+S+G
Subjt:  SQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLG

Query:  DGSKRVKVTDVTCGPGHEISIGSLGK
        DG K + V  VTCGPGH ISIGSLG+
Subjt:  DGSKRVKVTDVTCGPGHEISIGSLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGATTAAGTATTCGAACCTATTGTATGGTAATACTGTGTCTGGTGTCGATGTCACTAAGGCTTTGAAAGATGCATGGAATGACGCATGTGCATATGTT
CATCCAAGTGCGGTGGTTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGCCCTTGCGAGAGCCCTATTAAAATTCGAGTTCGTGGAACATTG
CACGCTCCAAAACACCCTCATGGGGATAGTTGGATTACTTTTGCATATGTTGATAGAATGACACTATCAGGTAGAGGAATTTTTGATAGCCAAGGAAAGGCAGGT
TGGGAAAAAAATGATTGCCATAAACGTATAGATTGTGCTAACCTCCCTATTAGTTTAAGATTCGACTTCATTACCAATTCAATTATGAGGAGAATAACATCACTC
GATAGCAAAAACTTCCATGTCAACATCCTATGGTGCAACAACCTCACATTCCAAGGTGTCAACATAATTACACTTGAAGATAGTCCCAACATAGATGGAATACAC
ATTGGTCGATCAATTGGGATCTCAATCTTAAAATCTCAAATAGTAACAGGAAATAAGTGCATCTCACTTGGAGATGGAAGCAAACGAGTGAAAGTCACCGATGTG
ACATGTGGGCCAGGTCACGAAATAAGCATAGGAAGTCTTGGAAAATCATTAATGAAGAACATGTTGAAGGTGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGATTAAGTATTCGAACCTATTGTATGGTAATACTGTGTCTGGTGTCGATGTCACTAAGGCTTTGAAAGATGCATGGAATGACGCATGTGCATATGTT
CATCCAAGTGCGGTGGTTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGCCCTTGCGAGAGCCCTATTAAAATTCGAGTTCGTGGAACATTG
CACGCTCCAAAACACCCTCATGGGGATAGTTGGATTACTTTTGCATATGTTGATAGAATGACACTATCAGGTAGAGGAATTTTTGATAGCCAAGGAAAGGCAGGT
TGGGAAAAAAATGATTGCCATAAACGTATAGATTGTGCTAACCTCCCTATTAGTTTAAGATTCGACTTCATTACCAATTCAATTATGAGGAGAATAACATCACTC
GATAGCAAAAACTTCCATGTCAACATCCTATGGTGCAACAACCTCACATTCCAAGGTGTCAACATAATTACACTTGAAGATAGTCCCAACATAGATGGAATACAC
ATTGGTCGATCAATTGGGATCTCAATCTTAAAATCTCAAATAGTAACAGGAAATAAGTGCATCTCACTTGGAGATGGAAGCAAACGAGTGAAAGTCACCGATGTG
ACATGTGGGCCAGGTCACGAAATAAGCATAGGAAGTCTTGGAAAATCATTAATGAAGAACATGTTGAAGGTGTCATAG
Protein sequenceShow/hide protein sequence
MGVIKYSNLLYGNTVSGVDVTKALKDAWNDACAYVHPSAVVIPKGIFKVREGEFKGPCESPIKIRVRGTLHAPKHPHGDSWITFAYVDRMTLSGRGIFDSQGKAG
WEKNDCHKRIDCANLPISLRFDFITNSIMRRITSLDSKNFHVNILWCNNLTFQGVNIITLEDSPNIDGIHIGRSIGISILKSQIVTGNKCISLGDGSKRVKVTDV
TCGPGHEISIGSLGKSLMKNMLKVS