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ChyUNG227200 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG227200
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationscaffold25_size3045174:2174173..2175102
RNA-Seq ExpressionChyUNG227200
SyntenyChyUNG227200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648362.1 hypothetical protein Csa_023127, partial [Cucumis sativus]7.92e-7197.46Show/hide
Query:  SPLSTSRISVAVHRRLEPDALQFLQPPTTGSTVPLLSVSCPASRPPPGFQCAIFHVRLHISTPSAPPSARIRFNFGVFKLAFEAKFRTVYYGRKLLVLLV
        SPLSTSRISVAVHRRLEPDALQFLQPPTTGSTVPLLSVSCPASRPPPGFQCAIFHVRLHISTPSAPPSARIRFNFGVFKLAFEAKFRTVYYG KL VLLV
Subjt:  SPLSTSRISVAVHRRLEPDALQFLQPPTTGSTVPLLSVSCPASRPPPGFQCAIFHVRLHISTPSAPPSARIRFNFGVFKLAFEAKFRTVYYGRKLLVLLV

Query:  LIHRLVLVECELIIVSKL
        LIHR+VLVECELIIVSKL
Subjt:  LIHRLVLVECELIIVSKL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGCCGCTGTCAACGTCTAGGATCTCCGTCGCCGTCCACCGTCGATTGGAGCCAGACGCCCTGCAATTTCTTCAGCCGCCGACCACAGGTTCTACCGTGCCACTCCTATC
TGTTTCATGCCCAGCCAGTCGGCCCCCGCCCGGCTTCCAGTGCGCCATTTTCCACGTCCGGCTTCACATCAGCACGCCGTCCGCCCCGCCATCAGCAAGGATTCGATTCA
ATTTTGGAGTGTTCAAATTAGCTTTTGAGGCAAAGTTTAGGACTGTTTACTACGGTCGTAAGCTGCTTGTTTTACTTGTTTTAATCCATAGACTTGTGTTGGTTGAGTGT
GAACTTATCATTGTGTCTAAGTTGA
mRNA sequenceShow/hide mRNA sequence
TCGCCGCTGTCAACGTCTAGGATCTCCGTCGCCGTCCACCGTCGATTGGAGCCAGACGCCCTGCAATTTCTTCAGCCGCCGACCACAGGTTCTACCGTGCCACTCCTATC
TGTTTCATGCCCAGCCAGTCGGCCCCCGCCCGGCTTCCAGTGCGCCATTTTCCACGTCCGGCTTCACATCAGCACGCCGTCCGCCCCGCCATCAGCAAGGATTCGATTCA
ATTTTGGAGTGTTCAAATTAGCTTTTGAGGCAAAGTTTAGGACTGTTTACTACGGTCGTAAGCTGCTTGTTTTACTTGTTTTAATCCATAGACTTGTGTTGGTTGAGTGT
GAACTTATCATTGTGTCTAAGTTGA
Protein sequenceShow/hide protein sequence
SPLSTSRISVAVHRRLEPDALQFLQPPTTGSTVPLLSVSCPASRPPPGFQCAIFHVRLHISTPSAPPSARIRFNFGVFKLAFEAKFRTVYYGRKLLVLLVLIHRLVLVEC
ELIIVSKLX