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ChyUNG227380 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG227380
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold25_size3045174:2678298..2678683
RNA-Seq ExpressionChyUNG227380
SyntenyChyUNG227380
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.93e-5671.76Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHLGGK +L RKW PGIVP   VF SVPVWI LG++P+ELWTEAGL VVA A+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MP++I VN+RG EF V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]2.59e-5770.99Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHLGGK +L RKW P IVP   VF SVPVWI LG++P+ELWTEAGL VVA A+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MP++I VN+RG EF V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]2.18e-5771.76Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHLGGK +L RKW PGIVP   VF SVPVWI LG++P+ELWTEAGL VVA A+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MP++I VN+RG EF V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

XP_031740405.1 uncharacterized protein LOC116403411 [Cucumis sativus]2.48e-6278.4Show/hide
Query:  MENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCV
        MENGLICFQF+  KSI WILS GPWHLGGK +LLRKW PGIVP   VF SVPVWIKLGRIPLELWT+AGL VVASAIGKP  ++LATKERRRLSYAR+CV
Subjt:  MENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCV

Query:  EMNVDSSMPADIIVNVRGEEFIVKV
        E+NVD+ MPA++ VN+RGEEFIV V
Subjt:  EMNVDSSMPADIIVNVRGEEFIVKV

XP_031745056.1 uncharacterized protein LOC116405235 [Cucumis sativus]1.37e-6578.63Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MPTITLMENGLI FQF+  KSI WILS GPWHLGGK +LLRKW PGIVP   VF SVPVWIKLGRIPLELWT+AGL VVASAIGKP S++LATKERR LS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YAR+CVE+NVDS MPA++ VN++GEEFIV V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

TrEMBL top hitse value%identityAlignment
A0A1S3CC83 uncharacterized protein LOC1034993239.3e-4771.76Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHLGGK +L RKW PGIVP   VF SVPVWI LG++P+ELWTEAGL VVA A+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MP++I VN+RG EF V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

A0A1S3CJ11 uncharacterized protein LOC1035013952.7e-4670.99Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHL  K +LLRKW PGIVP   VF SVPVWI+LG++P+ELWTEAGL VVASA+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MPA+I V++RG +F V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

A0A5A7TWG5 Reverse transcriptase domain-containing protein2.7e-4670.99Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHL  K +LLRKW PGIVP   VF SVPVWI+LG++P+ELWTEAGL VVASA+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MPA+I V++RG +F V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

A0A5A7V507 DUF4283 domain-containing protein9.3e-4771.76Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHLGGK +L RKW PGIVP   VF SVPVWI LG++P+ELWTEAGL VVA A+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MP++I VN+RG EF V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

A0A5D3D5X6 Reverse transcriptase domain-containing protein2.7e-4670.99Show/hide
Query:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS
        MP IT++EN LICFQFRR KS+ WILS GPWHL  K +LLRKW PGIVP   VF SVPVWI+LG++P+ELWTEAGL VVASA+GKP SL+LATKERRRLS
Subjt:  MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVP---VFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLS

Query:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV
        YARVCVE+   S+MPA+I V++RG +F V V
Subjt:  YARVCVEMNVDSSMPADIIVNVRGEEFIVKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding1.2e-0927.88Show/hide
Query:  LSSGPWHLGGKLLLLRKWIPGIVPV---FYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMPADIIVNVRGE
        L+ GPW + G  LL++ W     P+     + PVW++L  IP   +    L  +A  +G+P  +++ T    +  +ARVC+E+N+   +   +++N  G+
Subjt:  LSSGPWHLGGKLLLLRKWIPGIVPV---FYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMPADIIVNVRGE

Query:  EFIV
         + V
Subjt:  EFIV

AT2G07760.1 Zinc knuckle (CCHC-type) family protein2.3e-0526.92Show/hide
Query:  GPWHLGGKLLLLRKWI---PGIVPVFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMPADI-IVNVRGEEF
        G WH+   L+ +  W       +P   ++PVW+ L  IP  L++  G++ +AS +G P +      +   +S A + VE+ +  + P  I  V+ +G   
Subjt:  GPWHLGGKLLLLRKWI---PGIVPVFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMPADI-IVNVRGEEF

Query:  IVKV
        +V V
Subjt:  IVKV

AT5G28823.1 FUNCTIONS IN: molecular_function unknown2.3e-0527.06Show/hide
Query:  WHLGGKLLLLRKWIPGI---VPVFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMP
        WH+   L+ +  W P     VP    +P W+ L  IP +L++  G+  +AS IG+    +    +  ++  A++ VE+ +D   P
Subjt:  WHLGGKLLLLRKWIPGI---VPVFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSSMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATCACTCTTATGGAGAATGGCCTCATTTGTTTCCAATTTAGAAGACCGAAATCGATAAACTGGATCCTGTCCAGTGGTCCGTGGCACCTTGGAGGAAAACT
CTTGCTCCTTCGAAAATGGATTCCAGGTATTGTCCCTGTTTTTTATTCTGTTCCTGTTTGGATTAAACTAGGGCGAATCCCATTGGAATTATGGACAGAAGCCGGTCTGA
CGGTTGTTGCAAGTGCTATAGGAAAGCCTCAATCTTTAAATCTTGCTACCAAAGAGAGACGTAGGTTGTCTTATGCACGTGTTTGTGTGGAAATGAATGTTGACAGTTCT
ATGCCTGCTGATATAATTGTAAACGTTAGGGGAGAGGAGTTCATTGTGAAAGTAAC
mRNA sequenceShow/hide mRNA sequence
ATGCCTACAATCACTCTTATGGAGAATGGCCTCATTTGTTTCCAATTTAGAAGACCGAAATCGATAAACTGGATCCTGTCCAGTGGTCCGTGGCACCTTGGAGGAAAACT
CTTGCTCCTTCGAAAATGGATTCCAGGTATTGTCCCTGTTTTTTATTCTGTTCCTGTTTGGATTAAACTAGGGCGAATCCCATTGGAATTATGGACAGAAGCCGGTCTGA
CGGTTGTTGCAAGTGCTATAGGAAAGCCTCAATCTTTAAATCTTGCTACCAAAGAGAGACGTAGGTTGTCTTATGCACGTGTTTGTGTGGAAATGAATGTTGACAGTTCT
ATGCCTGCTGATATAATTGTAAACGTTAGGGGAGAGGAGTTCATTGTGAAAGTAAC
Protein sequenceShow/hide protein sequence
MPTITLMENGLICFQFRRPKSINWILSSGPWHLGGKLLLLRKWIPGIVPVFYSVPVWIKLGRIPLELWTEAGLTVVASAIGKPQSLNLATKERRRLSYARVCVEMNVDSS
MPADIIVNVRGEEFIVKVX