; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ChyUNG228560 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG228560
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationscaffold26_size3936274:2096419..2098160
RNA-Seq ExpressionChyUNG228560
SyntenyChyUNG228560
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]3.82e-12175.39Show/hide
Query:  MNSELPRLSIASAVTGLLVGADTAASLSCGSQSH-------------GEIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISR
        MN+E  +L IASAVTGLLVGA TAASL CGS                GEIDDMEE K+ RKSS+GS KKKRRKSLFEWSKGEELNLLKKLVEFN+KNISR
Subjt:  MNSELPRLSIASAVTGLLVGADTAASLSCGSQSH-------------GEIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISR

Query:  EEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQE
        EEFYPFLR+GSLAEVS+ QIF+KIQ+LK EYL+ KLELRKMRKRNVKLEDDDDYN+KRD+GFELSNQLWG+VDETERAS SK LEVC RNYYE FFES  
Subjt:  EEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQE

Query:  LDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPTN
        LDVQLF+PSFHDA KK IDHLFNLEHH  L K+KL  ++L+LK D+IQA V +PTN
Subjt:  LDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPTN

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]3.24e-4244.04Show/hide
Query:  SGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF+  N+  E+FYPFLR GSLA+V + QIF+KIQ+LKR++L+      K+  R   +   DD  N+RD+ FELS
Subjt:  SGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELS

Query:  NQLWGKVD---ETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPT
        N+LWG+ +   ET+  S SK  +    + +E  FE   L +  F PSF  A KK +D L +L++H  L K+ L  +L +LK+ + Q    + T
Subjt:  NQLWGKVD---ETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPT

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]5.03e-9978.54Show/hide
Query:  MEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDD
        MEEGK+GRK S GSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLR+GSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVK+EDDD
Subjt:  MEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDD

Query:  DYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVR
        D+NNKRD+GFELSN++WGKVDETERASISKVLE                          DAAKK ID LFNLEH  FLFKSKLV+KL+KLKNDIIQAP+ 
Subjt:  DYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVR

Query:  DPTNQ
        DPT+Q
Subjt:  DPTNQ

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]5.36e-0426.02Show/hide
Query:  EIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREE-FYPFLRDG-SLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNV
        E +  EE ++  KS+  S KK+ ++ + EW + +E+ +L++L +F   N S  + FY F++   +  +VS  Q+  KI   K+EYLK   E RK ++ ++
Subjt:  EIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREE-FYPFLRDG-SLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNV

Query:  KLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKL
        K  +  ++     + F LS ++WG           K  +      + ++ E  ++D+    PS  +  KK  +    +       KSK   KL++L
Subjt:  KLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKL

XP_024923140.1 transcription factor STKL2-like [Ziziphus jujuba]9.81e-0427.07Show/hide
Query:  KKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREE------FYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQG
        KK+++K +  WS+ +E+ +L+ L++    + S  +      +Y  ++D  +A+VS+ Q+ +K++ LKR+Y++ K    K+   N+ +    DY++   + 
Subjt:  KKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREE------FYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQG

Query:  FELSNQLWGKVDETERASISKVLEVCRRNYYED
        FELS Q+W +      +   K  EV  +N  +D
Subjt:  FELSNQLWGKVDETERASISKVLEVCRRNYYED

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein4.3e-7778.54Show/hide
Query:  MEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDD
        MEEGK+GRK S GSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLR+GSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVK+EDDD
Subjt:  MEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDD

Query:  DYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVR
        D+NNKRD+GFELSN++WGKVDETERASISKVLE                          DAAKK ID LFNLEH  FLFKSKLV+KL+KLKNDIIQAP+ 
Subjt:  DYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVR

Query:  DPTNQ
        DPT+Q
Subjt:  DPTNQ

A0A5A7UKP8 Uncharacterized protein1.3e-9475.39Show/hide
Query:  MNSELPRLSIASAVTGLLVGADTAASLSCGSQSH-------------GEIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISR
        MN+E  +L IASAVTGLLVGA TAASL CGS                GEIDDMEE K+ RKSS+GS KKKRRKSLFEWSKGEELNLLKKLVEFN+KNISR
Subjt:  MNSELPRLSIASAVTGLLVGADTAASLSCGSQSH-------------GEIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISR

Query:  EEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQE
        EEFYPFLR+GSLAEVS+ QIF+KIQ+LK EYL+ KLELRKMRKRNVKLEDDDDYN+KRD+GFELSNQLWG+VDETERAS SK LEVC RNYYE FFES  
Subjt:  EEFYPFLRDGSLAEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQE

Query:  LDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPTN
        LDVQLF+PSFHDA KK IDHLFNLEHH  L K+KL  ++L+LK D+IQA V +PTN
Subjt:  LDVQLFNPSFHDAAKKGIDHLFNLEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGTGAGCTGCCTCGGCTGTCCATCGCCTCCGCCGTCACGGGTCTTCTTGTGGGTGCTGACACCGCTGCGTCACTTTCCTGTGGATCGCAATCGCACGGT
GAGATTGACGATATGGAAGAAGGGAAGGACGGAAGAAAGAGCTCAATGGGATCAGGAAAGAAGAAAAGGAGGAAGAGTTTGTTTGAATGGAGTAAAGGGGAAGAG
CTAAATCTACTGAAGAAGCTGGTCGAGTTCAATACCAAGAACATTAGTCGCGAGGAATTTTATCCGTTCTTGAGAGATGGGTCATTGGCGGAGGTGTCCAGGACC
CAAATATTTGAGAAGATTCAAGAACTCAAAAGGGAATATTTGAAGCAGAAATTAGAGTTGAGAAAAATGAGAAAACGAAATGTGAAATTGGAGGATGATGATGAT
TATAATAATAAGAGAGACCAGGGTTTTGAGTTATCAAATCAACTTTGGGGTAAAGTTGATGAAACTGAAAGGGCTTCTATCTCTAAAGTGTTGGAGGTATGCAGA
AGGAATTATTATGAAGATTTTTTTGAAAGTCAAGAGCTTGATGTACAACTATTTAACCCATCTTTTCACGACGCAGCCAAGAAGGGTATTGACCATTTGTTCAAT
CTTGAACATCATTTCTTCTTATTCAAATCTAAGTTGGTGACTAAACTTCTCAAACTAAAGAACGACATTATTCAAGCTCCTGTCAGGGATCCTACCAATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGTGAGCTGCCTCGGCTGTCCATCGCCTCCGCCGTCACGGGTCTTCTTGTGGGTGCTGACACCGCTGCGTCACTTTCCTGTGGATCGCAATCGCACGGT
GAGATTGACGATATGGAAGAAGGGAAGGACGGAAGAAAGAGCTCAATGGGATCAGGAAAGAAGAAAAGGAGGAAGAGTTTGTTTGAATGGAGTAAAGGGGAAGAG
CTAAATCTACTGAAGAAGCTGGTCGAGTTCAATACCAAGAACATTAGTCGCGAGGAATTTTATCCGTTCTTGAGAGATGGGTCATTGGCGGAGGTGTCCAGGACC
CAAATATTTGAGAAGATTCAAGAACTCAAAAGGGAATATTTGAAGCAGAAATTAGAGTTGAGAAAAATGAGAAAACGAAATGTGAAATTGGAGGATGATGATGAT
TATAATAATAAGAGAGACCAGGGTTTTGAGTTATCAAATCAACTTTGGGGTAAAGTTGATGAAACTGAAAGGGCTTCTATCTCTAAAGTGTTGGAGGTATGCAGA
AGGAATTATTATGAAGATTTTTTTGAAAGTCAAGAGCTTGATGTACAACTATTTAACCCATCTTTTCACGACGCAGCCAAGAAGGGTATTGACCATTTGTTCAAT
CTTGAACATCATTTCTTCTTATTCAAATCTAAGTTGGTGACTAAACTTCTCAAACTAAAGAACGACATTATTCAAGCTCCTGTCAGGGATCCTACCAATCAATAA
Protein sequenceShow/hide protein sequence
MNSELPRLSIASAVTGLLVGADTAASLSCGSQSHGEIDDMEEGKDGRKSSMGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRDGSLAEVSRT
QIFEKIQELKREYLKQKLELRKMRKRNVKLEDDDDYNNKRDQGFELSNQLWGKVDETERASISKVLEVCRRNYYEDFFESQELDVQLFNPSFHDAAKKGIDHLFN
LEHHFFLFKSKLVTKLLKLKNDIIQAPVRDPTNQ