; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ChyUNG229860 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG229860
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRNA exonuclease 4
Genome locationscaffold32_size1584725:82998..95882
RNA-Seq ExpressionChyUNG229860
SyntenyChyUNG229860
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045030.1 apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]2.63e-24696.67Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIG+LR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMTLS+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

KAA0046505.1 apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]2.91e-22892.12Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLR HLMG +       IF   GCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSD YEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMT S+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

TYJ96296.1 apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]2.63e-24696.67Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMTLS+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

XP_004142658.1 apoptosis-enhancing nuclease isoform X2 [Cucumis sativus]5.04e-23393.64Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPESLS+HQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDH RQVMTLSITPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSRSNFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

XP_011653750.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus]5.47e-24797.58Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLS+HQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDH RQVMTLSITPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSRSNFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

TrEMBL top hitse value%identityAlignment
A0A1S3BLT2 RNA exonuclease 41.7e-17296.33Show/hide
Query:  MGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEK
        MGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDEDEK
Subjt:  MGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEK

Query:  LIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV
        LIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIG+LR NGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV
Subjt:  LIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV

Query:  SHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKDLEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        SHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMTLS+TPSCIQYVAPNLDSH+AKDLEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  SHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKDLEKLNPDELYEMSRSNFKCWCHDSRRVMQT

A0A1S3CNZ6 RNA exonuclease 42.0e-17095.67Show/hide
Query:  MGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEK
        MGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSD YEEDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDEDEK
Subjt:  MGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEK

Query:  LIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV
        LIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR NGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV
Subjt:  LIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLV

Query:  SHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKDLEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        SHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMT S+TPSCIQYVAPNLDSH+AKDLEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  SHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKDLEKLNPDELYEMSRSNFKCWCHDSRRVMQT

A0A5A7TPB9 RNA exonuclease 42.5e-19296.67Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIG+LR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMTLS+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

A0A5A7TYQ2 RNA exonuclease 41.5e-17892.12Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLR HLMG +       IF   GCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSD YEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMT S+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

A0A5D3BBM9 RNA exonuclease 42.5e-19296.67Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA
        MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPE+LSEHQDICCI APVHQGTSLPPTDLSDCYEEDRSDRGLGA
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA

Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IA+DCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR NGGKAKLLVGHDLE
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYE+CVSVMRLYKRMRSLDHRRQVMTLS+TPSCIQYVAPNLDSH+AKD
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKD

Query:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT
        LEK+ PDELYEMSR+NFKCWCHDSRRVMQT
Subjt:  LEKLNPDELYEMSRSNFKCWCHDSRRVMQT

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 42.7e-1831.03Show/hide
Query:  IKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA-IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQ
        IK PV  G S       D        + +G  IA+DC   G G +G       I +V+    ++ + FV+P+  +  +R  V+G+K EHM+ A+  K  Q
Subjt:  IKAPVHQGTSLPPTDLSDCYEEDRSDRGLGA-IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQ

Query:  EKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKR
        +K   +L              + ++LVGH L+HDL+ L +++P  +LRDT+R+ P  K      + SLK LTR  L   I++  H   E   + M LYK+
Subjt:  EKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKR

Query:  MRS
         ++
Subjt:  MRS

Q4IEV5 RNA exonuclease 41.6e-1832.39Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        IAIDC M G G  G       + +VD     I++++V+P+  +TN+R  V+G+ ++ MR+A   + VQ ++ KLL              + ++LVGHDL+
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRS---LDH
        HDL+ L +++P   +RDTA++    K  N    SL+ L +  LG +I+   H   E   + M L+++ +S   +DH
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRS---LDH

Q6CMT3 RNA exonuclease 42.9e-1731.14Show/hide
Query:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE
        +++DC   G G DG       + +V+    ++ + FV+P+ P+T++R  V+G+K  HM  A+  ++ Q++V  +L              K ++LVGH + 
Subjt:  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYK
        HDL  L +++P  M+RDT+R+ P  +  +   + SLK LT+  L  DI+   H   E   + M LYK
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYK

Q7S9B7 RNA exonuclease 41.7e-1730.81Show/hide
Query:  TDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIG
        TDL+   +  +S+     ++IDC M G G  GA  +     +VD     I++++V+P   +T++R  V+G+ + HM  A   ++VQ  V  LL       
Subjt:  TDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIG

Query:  RLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKR
               K ++LVGHD++HDL+ L   +P   +RDTA+Y    K  +    SL+ L +  LG +I Q  H   E     M L+++
Subjt:  RLRLNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKR

Q9GZR2 RNA exonuclease 42.2e-1731.14Show/hide
Query:  AIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDL
        A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G++ E+++    L+ VQ++V ++L              K ++LVGH L
Subjt:  AIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDL

Query:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLY
         +DL  L +++P   +RDT +Y P  K+ + S   SL+ L+   LG  ++Q  H   +   + MRLY
Subjt:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLY

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein3.7e-9251.23Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL
        M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+EH++ C +  P   GTS      S       +   L
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL

Query:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD
         A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE CVS MRLYKRMR  +H            C      N L+S  
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN

Query:  AKDLEKLNPDELYEMSRSNFKCWCHD
          DLEK+N +ELY+ S S ++CWC D
Subjt:  AKDLEKLNPDELYEMSRSNFKCWCHD

AT2G48100.2 Exonuclease family protein3.7e-9251.23Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL
        M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+EH++ C +  P   GTS      S       +   L
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL

Query:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD
         A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE CVS MRLYKRMR  +H            C      N L+S  
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN

Query:  AKDLEKLNPDELYEMSRSNFKCWCHD
          DLEK+N +ELY+ S S ++CWC D
Subjt:  AKDLEKLNPDELYEMSRSNFKCWCHD

AT2G48100.3 Exonuclease family protein3.7e-9251.23Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL
        M++SYHS+HQPRCGVCLKHCKSFES+REHL  P  LSK NC  IF+++GC LCL++ +   +L+EH++ C +  P   GTS      S       +   L
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGP--LSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGL

Query:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD
         A+A+DC M GGG+DG +D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLGY I+   H+ YE CVS MRLYKRMR  +H            C      N L+S  
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPN-LDSHN

Query:  AKDLEKLNPDELYEMSRSNFKCWCHD
          DLEK+N +ELY+ S S ++CWC D
Subjt:  AKDLEKLNPDELYEMSRSNFKCWCHD

AT3G27970.1 Exonuclease family protein1.7e-8948.01Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQG--TSLPPTDLSDCYEED-RSDRG
        M++SYHS H+P CGVC KHC+SFESLREHL+GPL K  C  IFS +GC  C+ +L+ P S   HQ+ C   + V+ G  T +    L D    D  S R 
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQG--TSLPPTDLSDCYEED-RSDRG

Query:  LGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGH
           +A+ C M GGGSDG+LD+C  +C+ DE + +IF+T+V+P + +T+YR+E TG++ E++R AMPLK VQ K+ + L NGE + ++R  GGKA++LVGH
Subjt:  LGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGH

Query:  DLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHN
         L+HDLD L++ YP  M+RDTA+Y PLMKT+ +S+SLKYLT+AYLGYD+     DPYE CV+ MRLY RMR   H+ +   L+           N  +  
Subjt:  DLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHN

Query:  AKDLEKLNPDELYEMSRSNFKCWCHDS
          + E+++PDE+  +SRS++ CWC DS
Subjt:  AKDLEKLNPDELYEMSRSNFKCWCHDS

AT5G40310.1 Exonuclease family protein7.3e-8846.85Show/hide
Query:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDL---SDCYEEDRSDRG
        MR+SYHSVH+P CG+C KHC+SF+SLREHL+GPL K  C  IFS +GC  CL +L+ P +   HQ+ C + + V  G  +    L   ++   +  S R 
Subjt:  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDL---SDCYEEDRSDRG

Query:  LGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGH
           +A+ C M GGGSDG+LD+C  +C+ DE E ++F+T+V+P IP+TNYR+E+TG++ E++R AM LK+ Q KV + L NGE + ++R   GKA++LVGH
Subjt:  LGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGH

Query:  DLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHN
         L++ LD L++ Y   M+RDTA Y PLMK++ +S+SLKYLT+AYLGYDI     DPYE CV+ MRLY RMR   HR +   L          A +  +HN
Subjt:  DLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHN

Query:  ------AKDLEKLNPDELYEMSRSNFKCWCHDS
                +LE+++P+EL ++SRS++ CWC DS
Subjt:  ------AKDLEKLNPDELYEMSRSNFKCWCHDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCA
AAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGAGCACCAAGACATTTGCTGCATA
AAAGCACCAGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGT
GTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAA
ATACCGATCACGAACTACAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTG
TTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGAATGAATTAT
CCCGATCATATGTTAAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGAT
ATTCGGCAAGATGGGCACGACCCTTACGAAAGCTGTGTATCAGTAATGCGATTGTATAAAAGAATGCGTAGTCTTGATCACCGTAGACAAGTTATGACCCTGTCA
ATTACTCCTTCCTGTATCCAGTATGTTGCTCCCAATCTTGATTCCCATAATGCAAAAGATCTTGAAAAGTTGAATCCAGATGAACTTTATGAGATGTCGAGATCA
AACTTTAAGTGTTGGTGTCATGACTCCAGACGAGTTATGCAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTCCACTTTCA
AAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGAGCACCAAGACATTTGCTGCATA
AAAGCACCAGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGT
GTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAA
ATACCGATCACGAACTACAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTG
TTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGAATGAATTAT
CCCGATCATATGTTAAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGAT
ATTCGGCAAGATGGGCACGACCCTTACGAAAGCTGTGTATCAGTAATGCGATTGTATAAAAGAATGCGTAGTCTTGATCACCGTAGACAAGTTATGACCCTGTCA
ATTACTCCTTCCTGTATCCAGTATGTTGCTCCCAATCTTGATTCCCATAATGCAAAAGATCTTGAAAAGTTGAATCCAGATGAACTTTATGAGATGTCGAGATCA
AACTTTAAGTGTTGGTGTCATGACTCCAGACGAGTTATGCAGACTTAG
Protein sequenceShow/hide protein sequence
MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPESLSEHQDICCIKAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDC
VMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRMNY
PDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQDGHDPYESCVSVMRLYKRMRSLDHRRQVMTLSITPSCIQYVAPNLDSHNAKDLEKLNPDELYEMSRS
NFKCWCHDSRRVMQT