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ChyUNG230060 (gene) of Cucumber (hystrix) v1 genome

Gene IDChyUNG230060
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold32_size1584725:512204..512512
RNA-Seq ExpressionChyUNG230060
SyntenyChyUNG230060
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]1.16e-3164.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTPG                  ++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]1.16e-3164.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTPG                  ++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]4.72e-3262.75Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL GK M+ RKWTP                  G++PMELWT+A L VVA A+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]1.29e-3162.75Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL GK M+ RKWTPG                  ++PMELWT+A L VVA A+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]1.07e-3164.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTPG                  ++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPG------------------RIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013956.0e-2664.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTP                  G++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

A0A5A7TWG5 Reverse transcriptase domain-containing protein6.0e-2664.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTP                  G++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

A0A5A7V507 DUF4283 domain-containing protein1.7e-2562.75Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL GK M+ RKWTP                  G++PMELWT+A L VVA A+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

A0A5D3D5X6 Reverse transcriptase domain-containing protein6.0e-2664.71Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL  KSM+LRKWTP                  G++PMELWT+A L VVASA+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

A0A5D3DSG9 DUF4283 domain-containing protein1.7e-2562.75Show/hide
Query:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS
        MP ITILEN LICFQFRR K VEWILSRG  HL GK M+ RKWTP                  G++PMELWT+A L VVA A+ KP+SLDLATKERRRLS
Subjt:  MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTP------------------GRIPMELWTDARLTVVASAISKPLSLDLATKERRRLS

Query:  HA
        +A
Subjt:  HA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACGATTACAATTCTTGAGAACACACTCATCTGTTTCCAATTCAGACGCCCAAAATTTGTTGAATGGATCCTATCTCGTGGATCGCGACATCTTGCTGGC
AAAAGTATGGTCCTCCGTAAATGGACTCCAGGTAGGATTCCAATGGAGTTATGGACAGATGCCAGATTGACTGTTGTGGCTAGTGCTATAAGCAAACCTCTATCT
TTAGATCTAGCTACTAAGGAAAGACGAAGGTTGTCACATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACGATTACAATTCTTGAGAACACACTCATCTGTTTCCAATTCAGACGCCCAAAATTTGTTGAATGGATCCTATCTCGTGGATCGCGACATCTTGCTGGC
AAAAGTATGGTCCTCCGTAAATGGACTCCAGGTAGGATTCCAATGGAGTTATGGACAGATGCCAGATTGACTGTTGTGGCTAGTGCTATAAGCAAACCTCTATCT
TTAGATCTAGCTACTAAGGAAAGACGAAGGTTGTCACATGCTTGA
Protein sequenceShow/hide protein sequence
MPTITILENTLICFQFRRPKFVEWILSRGSRHLAGKSMVLRKWTPGRIPMELWTDARLTVVASAISKPLSLDLATKERRRLSHA