CuGenDBv2

Gene ID	ChyUNG232780
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NADH dehydrogenase subunit 7
Genome location	scaffold39_size246216:213721..213915
RNA-Seq Expression	ChyUNG232780
Synteny	ChyUNG232780
Gene Ontology terms	GO:0006811 - ion transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

AZP40280.1 NADH dehydrogenase subunit 7 [Cucumis melo var. momordica]

3.86e-26

100

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
        NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE

GFQ01817.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Phtheirospermum japonicum]

1.17e-36

95.38

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Query:  MLGWATSNGVSRMRGDPHVRFLGGSGRKTG-AHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        M GWATSNGVSRMRGDPHV FLGGSGRKTG AHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
Subjt:  MLGWATSNGVSRMRGDPHVRFLGGSGRKTG-AHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

KAE8647103.1 hypothetical protein Csa_021706 [Cucumis sativus]

8.59e-41

100

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Query:  MLGWATSNGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        MLGWATSNGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
Subjt:  MLGWATSNGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

KAG4199295.1 hypothetical protein ERO13_A05G138400v2 [Gossypium hirsutum]

3.54e-17

68.33

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Query:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        T NGV+ M GD HVRFLGG G + G  +PTRGTEKLIEYKTYLQALP     EG+ GVTE
Subjt:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

TYH16843.1 hypothetical protein ES288_A05G147500v1 [Gossypium darwinii]

1.44e-16

66.67

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Query:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        T NGV+ M G+ HVRFLGG G + G  +PTRGTEKLIEYKTYLQALP     EG+ GVTE
Subjt:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

TrEMBL top hits

e value

%identity

Alignment

A0A0E0DVR6 Uncharacterized protein

3.2e-11

92.11

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Query:  RKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        R  GAHPTRGTEKLIEYKTYLQALPY DRSEGDRGVTE
Subjt:  RKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

A0A3Q7EEY5 Uncharacterized protein

8.1e-23

87.69

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Query:  MLGWATSNGVSRMRGDPHVRFLGGSGRK-TGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        MLGWATSNGVSRM GD HVRFLGGSGRK  GAHPTRGTEKLIEYKTYLQALPY DR EGD  VTE
Subjt:  MLGWATSNGVSRMRGDPHVRFLGGSGRK-TGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

A0A3S9JIE4 NADH dehydrogenase subunit 7

1.7e-20

100

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
        NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE

A0A4D8YFM0 Uncharacterized protein

9.9e-13

69.49

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Query:  SNGVSRMRGDPHVRFLGG-SGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        + G  R+   P  R +G    R  GAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
Subjt:  SNGVSRMRGDPHVRFLGG-SGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

A0A5D2GG31 Uncharacterized protein

4.2e-11

66.67

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Query:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        T NGV+ M G+ HVRFLGG G + G  +PTRGTEKLIEYKTYLQALP     EG+ GVTE
Subjt:  TSNGVSRMRGDPHVRFLGGSGRKTGA-HPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

SwissProt top hits

e value

%identity

Alignment

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

6.6e-06

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
        NG    R +PH+  L            RGTEKLIEYKTYLQALPY DRS+
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE

Q2RU37 NADH-quinone oxidoreductase subunit D

2.5e-05

59.52

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Query:  RGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR
        R DPH+  L            RGTEKLIEYKTYLQALPY DR
Subjt:  RGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

4.6e-07

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
        NG    R +PH+  L            RGTEKLIEYKTYLQALPYSDRSE
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE

Q37619 NADH-ubiquinone oxidoreductase 49 kDa subunit

2.5e-05

54.17

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR
        NG    R DPH+  L            RGTEKLIEYK YLQALPY DR
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR

Q9TC96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

3.3e-05

54.17

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR
        NG    R DPH+  L            RGTEKLIEYKTY QALPY DR
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00510.1 NADH dehydrogenase subunit 7

1.6e-07

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Query:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE
        NG    R +PH+  L            RGTEKLIEYKTYLQALPYSDRS+
Subjt:  NGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSE

Sequences

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CDS sequence

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ATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGTTTTTAGGGGGATCTGGTCGAAAGACCGGCGCCCACCCGACTAGA
GGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGGAGTCACTGAATGA

mRNA sequence

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ATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGTTTTTAGGGGGATCTGGTCGAAAGACCGGCGCCCACCCGACTAGA
GGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGGAGTCACTGAATGA

Protein sequence

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MLGWATSNGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

ChyUNG232780 (gene) of Cucumber (hystrix) v1 genome