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ClCG01G002060 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G002060
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCox19-like CHCH family protein
Genome locationCG_Chr01:2002120..2004259
RNA-Seq ExpressionClCG01G002060
SyntenyClCG01G002060
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042698.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa]1.8e-2492.42Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI-KKNA
        MDEPQ  PVCAQEALNLLNCVTESPFDQ+KCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI KKN+
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI-KKNA

KAF5734209.1 hypothetical protein HS088_TW16G00654 [Tripterygium wilfordii]1.0e-1680.36Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE
        MDE +A PVCAQEAL+LLNCVT+SPFDQEKC +LL+SLRECVL+KKVKKFSLA++E
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE

KAG6606053.1 hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2086.44Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTK
        MD+ QA PVCAQEAL+LLNCVT+SPFDQEKCYRLLHSLRECVLSKKVKKFSLA+EE+ K
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTK

KAG7017003.1 hypothetical protein SDJN02_22114, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1879.03Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPIK
        M EP++ PVCAQEAL+LLNCVTESPFDQ+KCYRLLHSLRECV+S   KKFSLA+EEQTK +K
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPIK

KGN50036.1 hypothetical protein Csa_000619 [Cucumis sativus]3.6e-2595.45Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP-IKKNA
        MDEPQ  PVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP IKKNA
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP-IKKNA

TrEMBL top hitse value%identityAlignment
A0A0A0KQS7 Uncharacterized protein1.7e-2595.45Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP-IKKNA
        MDEPQ  PVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP IKKNA
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP-IKKNA

A0A5D3C4E2 Cox19-like CHCH family protein8.6e-2592.42Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI-KKNA
        MDEPQ  PVCAQEALNLLNCVTESPFDQ+KCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI KKN+
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPI-KKNA

A0A5J4ZSA8 Uncharacterized protein4.3e-1674.24Show/hide
Query:  MDEPQ-AHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE--QTKPIKK
        MD+ Q   PVCAQEALNLLNCVTESPFDQ+KC RLLHSLR+CV SKKVKKFSLAE++  +  PI K
Subjt:  MDEPQ-AHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE--QTKPIKK

A0A7J7CJI7 Uncharacterized protein5.1e-1780.36Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE
        MDE +A PVCAQEAL+LLNCVT+SPFDQEKC +LL+SLRECVL+KKVKKFSLA++E
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE

M5WP14 Uncharacterized protein5.6e-1670.15Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQ--TKPIKKNA
        M++ +   VC QEAL+LLNCVT+SPFDQEKC RLL+SLRECVL+KKVKKFSLA++EQ   KPI K A
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQ--TKPIKKNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23760.1 Cox19-like CHCH family protein3.8e-1767.86Show/hide
Query:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE
        M++    P+C QEAL LLNCV ESPFDQEKC R L SLRECVLSKKVKKFS+  ++
Subjt:  MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACCTCAAGCTCACCCGGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAATTGCGTTACGGAATCTCCCTTCGATCAAGAGAAATGCTACCGTCTCCTTCATTC
TTTGCGTGAATGCGTGCTCTCCAAGAAAGTGAAGAAGTTTTCTCTGGCTGAAGAAGAACAAACAAAACCAATCAAGAAGAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
CGTGTGGGTTGGCACGTGGGAATCCTCTTTTCCCCATTTTAGGCGCAGCTTTTGGGTTTCTTTCGTTCTCCACCCATTGTTTCTCCATTCCCTTTGTTAAACAAACAAGC
TGCAGCAGCTCGCTTGTTTTTGAAATCCACTTACAGTTCCGCGATGGATGAACCTCAAGCTCACCCGGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAATTGCGTTACGG
AATCTCCCTTCGATCAAGAGAAATGCTACCGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCTCCAAGAAAGTGAAGAAGTTTTCTCTGGCTGAAGAAGAACAAACAAAA
CCAATCAAGAAGAATGCTTGAAGGAAGCAATTTTGCAAGAAGAAGAAGAAGTAACCATCGCTAGCAGCAGGAGGTTGAGCCGGAGCCAAAGATTGAGCATGAGCAGAGGA
AAGCATAGCCAAAAGCAAAGCAACAGCAAACAAAGGGACCTTATAAGCAACGACCGCCATTGTAGAAAGTTGTAAGTGAAAATTAAAAAGAAAGAGAAAAAAAAAAAAAA
A
Protein sequenceShow/hide protein sequence
MDEPQAHPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPIKKNA