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ClCG01G004455 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G004455
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionADP-ribosylation factor
Genome locationCG_Chr01:4767282..4769229
RNA-Seq ExpressionClCG01G004455
SyntenyClCG01G004455
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABO42744.1 putative ADP-ribosylation factor, partial [Echinacea angustifolia]8.5e-1377.08Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        WY    + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

KAG5567848.1 hypothetical protein RHGRI_003133 [Rhododendron griersonianum]5.0e-1370.91Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYVRS
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNEV  +V S
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYVRS

RID70325.1 hypothetical protein BRARA_C02354 [Brassica rapa]3.8e-1371.7Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYV
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNEV  Y+
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYV

RYQ89432.1 hypothetical protein Ahy_B09g096084 isoform A [Arachis hypogaea]8.5e-1371.43Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV--FAYVR
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNEV  F+Y R
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV--FAYVR

XP_022742394.1 ADP-ribosylation factor 2-B-like [Durio zibethinus]1.1e-1282.22Show/hide
Query:  NPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV
        NP  IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE+
Subjt:  NPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV

TrEMBL top hitse value%identityAlignment
A0A397ZYT9 Uncharacterized protein1.8e-1371.7Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYV
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNEV  Y+
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYV

A0A444XI55 Uncharacterized protein4.1e-1371.43Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV--FAYVR
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNEV  F+Y R
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV--FAYVR

A0A6P5YPH9 ADP-ribosylation factor 2-B-like5.4e-1382.22Show/hide
Query:  NPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV
        NP  IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE+
Subjt:  NPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEV

A8QVN4 Putative ADP-ribosylation factor (Fragment)4.1e-1377.08Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        WY    + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

M0SFQ5 Uncharacterized protein5.4e-1336.84Show/hide
Query:  VTAASCLSIQSEDETAHNRKKLS--FWCRLVSLMKNRGYGQVGYFELGVHRRTSDVNHILRIG------RRILMFLRLLPIMKGTNEVVALDEVIDWAKE
        +TA + +S Q  D  A  R  L+  F  R +  ++ +G   + + +L           IL +G        IL  L+L  I+     +    E +++   
Subjt:  VTAASCLSIQSEDETAHNRKKLS--FWCRLVSLMKNRGYGQVGYFELGVHRRTSDVNHILRIG------RRILMFLRLLPIMKGTNEVVALDEVIDWAKE

Query:  D---WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
            W     + IRPLWRHYFQNTQG+IFVVDSND D +V+ARDELHR LNE
Subjt:  D---WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

SwissProt top hitse value%identityAlignment
O23778 ADP-ribosylation factor 11.6e-1475Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

P0DH91 ADP-ribosylation factor 2-B1.6e-1475Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

P36397 ADP-ribosylation factor 11.6e-1475Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

P51822 ADP-ribosylation factor 11.6e-1475Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

Q9LQC8 ADP-ribosylation factor 2-A1.6e-1475Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F1.1e-1575Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

AT1G23490.1 ADP-ribosylation factor 11.1e-1575Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

AT1G70490.1 Ras-related small GTP-binding family protein1.1e-1575Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

AT1G70490.2 Ras-related small GTP-binding family protein1.1e-1575Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE

AT1G70490.3 Ras-related small GTP-binding family protein1.1e-1575Show/hide
Query:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE
        W     + IRPLWRHYFQNTQG+IFVVDSND D VV+ARDELHR LNE
Subjt:  WYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACAGCTGTTCAACGGTCAAAGTCAAATGCGCTTCAGAGAGGCGTTCCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGCCAGTTGTCTCTCCATACAA
TCTGAGGATGAGACTGCGCATAATCGAAAGAAGTTAAGCTTCTGGTGTCGTCTCGTTTCACTGATGAAAAATCGAGGGTACGGTCAGGTCGGCTATTTCGAGTTA
GGGGTTCATCGGAGAACTTCCGATGTTAATCACATATTAAGAATAGGACGGCGAATTCTTATGTTCTTGAGATTGCTTCCGATAATGAAGGGGACAAACGAAGTA
GTTGCTCTTGATGAAGTAATTGATTGGGCAAAAGAAGACTGGTACGATTCCAACCCTAACGCAATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACACAGGGT
ATCATATTTGTTGTTGATAGCAATGATGGAGATGGAGTTGTTAAGGCCAGGGATGAATTGCATAGGAAGTTGAATGAGGTATTTGCATATGTACGGTCTAAGTTC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACAGCTGTTCAACGGTCAAAGTCAAATGCGCTTCAGAGAGGCGTTCCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGCCAGTTGTCTCTCCATACAA
TCTGAGGATGAGACTGCGCATAATCGAAAGAAGTTAAGCTTCTGGTGTCGTCTCGTTTCACTGATGAAAAATCGAGGGTACGGTCAGGTCGGCTATTTCGAGTTA
GGGGTTCATCGGAGAACTTCCGATGTTAATCACATATTAAGAATAGGACGGCGAATTCTTATGTTCTTGAGATTGCTTCCGATAATGAAGGGGACAAACGAAGTA
GTTGCTCTTGATGAAGTAATTGATTGGGCAAAAGAAGACTGGTACGATTCCAACCCTAACGCAATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACACAGGGT
ATCATATTTGTTGTTGATAGCAATGATGGAGATGGAGTTGTTAAGGCCAGGGATGAATTGCATAGGAAGTTGAATGAGGTATTTGCATATGTACGGTCTAAGTTC
TGA
Protein sequenceShow/hide protein sequence
MLTAVQRSKSNALQRGVPRQFSVGSVTAASCLSIQSEDETAHNRKKLSFWCRLVSLMKNRGYGQVGYFELGVHRRTSDVNHILRIGRRILMFLRLLPIMKGTNEV
VALDEVIDWAKEDWYDSNPNAIRPLWRHYFQNTQGIIFVVDSNDGDGVVKARDELHRKLNEVFAYVRSKF