; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G005460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G005460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGATA transcription factor
Genome locationCG_Chr01:5840669..5841258
RNA-Seq ExpressionClCG01G005460
SyntenyClCG01G005460
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015332.1 GATA transcription factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3454.49Show/hide
Query:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD
        +E ++LSP+L      CFNP N+ +SD+F VDQLLDFSN D F+Q QTPD+ D+H    S+++S ++IH+NSIV+D PSLPS EL  P DDLA+LEWLS 
Subjt:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD

Query:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT
        FVEDSFSGFS      FP  GISSL+KSS  S    +              F+ PIPV+ARSKRTRT
Subjt:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT

XP_004146485.1 GATA transcription factor 5 [Cucumis sativus]4.6e-3757.31Show/hide
Query:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE
        ME V LSP+LCFNP NVVSSD+F VDQLLD S+HD+FLQ QTP   DD DK S SLS  +SAQ+IH++SIV+D PSLP++EL  PADDL +LEWLS FVE
Subjt:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE

Query:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGAL------FQDPIPVRARSKRTRTS
        DSFSGFS PF  P         MKSS +       T E++     G++      F+ PIP +ARSKR RTS
Subjt:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGAL------FQDPIPVRARSKRTRTS

XP_008465634.1 PREDICTED: GATA transcription factor 5-like [Cucumis melo]1.9e-3860Show/hide
Query:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE
        ME V LSP+LCFNP NVVSSD+F VDQLLD S+HD+FLQ QTP   DD DK S SLS  +SAQ+IH++SIV+DLPSLPS+EL  PADDL +LEWLS FVE
Subjt:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE

Query:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS
        DSFSGFS PF          SLMKSS +         +          F+ PIPV+ARSKR RTS
Subjt:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS

XP_022985049.1 GATA transcription factor 5-like [Cucurbita maxima]3.3e-3555.69Show/hide
Query:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD
        +E ++LSP+L      CFNP N+ +SD+F VDQLLDFSN D F+Q QTPD+ D+H    S+++S Q+IH NSIV+D PSLPS EL  P DDLA+LEWLS 
Subjt:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD

Query:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT
        FVEDSFSGFS      FP  GISSL+KSS  S    +  G           F+ PIPV+ARSKRTRT
Subjt:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT

XP_038876782.1 GATA transcription factor 5-like [Benincasa hispida]7.6e-4060.59Show/hide
Query:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPD--DGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWL
        ME VELSP+L      CFNP NVVSSD+F VDQLLD S+HD+FLQ QTPD  D DK S SLS  +S Q+IH +S V+DLPSLPS+EL  PADDLA+LEWL
Subjt:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPD--DGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWL

Query:  SDFVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS
        S FVEDSFSGFS     PFP PG+SSLMKSS ++                   F+ PIPV+ARSKRTR S
Subjt:  SDFVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUP5 GATA transcription factor2.2e-3757.31Show/hide
Query:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE
        ME V LSP+LCFNP NVVSSD+F VDQLLD S+HD+FLQ QTP   DD DK S SLS  +SAQ+IH++SIV+D PSLP++EL  PADDL +LEWLS FVE
Subjt:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE

Query:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGAL------FQDPIPVRARSKRTRTS
        DSFSGFS PF  P         MKSS +       T E++     G++      F+ PIP +ARSKR RTS
Subjt:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGAL------FQDPIPVRARSKRTRTS

A0A1S3CPB9 GATA transcription factor9.0e-3960Show/hide
Query:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE
        ME V LSP+LCFNP NVVSSD+F VDQLLD S+HD+FLQ QTP   DD DK S SLS  +SAQ+IH++SIV+DLPSLPS+EL  PADDL +LEWLS FVE
Subjt:  MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTP---DDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSDFVE

Query:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS
        DSFSGFS PF          SLMKSS +         +          F+ PIPV+ARSKR RTS
Subjt:  DSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTS

A0A2N9GQS4 GATA-type domain-containing protein3.7e-1640Show/hide
Query:  NPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNS------IVTDLPSLPSTEL--PADDLANLEWLSDFVEDSFSGFSTP
        N  N V+ D+  VD+LLDFSN D F++ +  ++ +       +++S QQ H NS      +  +  S+P++EL  PADDLANLEWLS FVEDSFS FS P
Subjt:  NPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNS------IVTDLPSLPSTEL--PADDLANLEWLSDFVEDSFSGFSTP

Query:  FHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT
        +      PGI      +  S     T  ++     +   F+ P+P +ARSKRTRT
Subjt:  FHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT

A0A6J1ENF7 GATA transcription factor1.0e-3454.49Show/hide
Query:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD
        +E ++LSP+L      CFNP N+ +SD+F VDQLLDFSN D F+Q QTPD+ D+H    S+++S ++IH+NSIV+D PSLPS EL  P DDLA+LEWLS 
Subjt:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD

Query:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT
        FVEDSFSGFS      FP  GISSL+KSS  S    +              F+ PIPV+ARSKRTRT
Subjt:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT

A0A6J1JC71 GATA transcription factor1.6e-3555.69Show/hide
Query:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD
        +E ++LSP+L      CFNP N+ +SD+F VDQLLDFSN D F+Q QTPD+ D+H    S+++S Q+IH NSIV+D PSLPS EL  P DDLA+LEWLS 
Subjt:  MEYVELSPEL------CFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTEL--PADDLANLEWLSD

Query:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT
        FVEDSFSGFS      FP  GISSL+KSS  S    +  G           F+ PIPV+ARSKRTRT
Subjt:  FVEDSFSGFSTPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRT

SwissProt top hitse value%identityAlignment
O49743 GATA transcription factor 47.0e-0434.44Show/hide
Query:  HNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLS---IAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF
        + + S D   +D LLDFSN + F    T       S + S    +  +      +++TD        +P+DD A+LEWLS FV+DSFS F
Subjt:  HNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLS---IAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF

O65515 GATA transcription factor 79.7e-0640.23Show/hide
Query:  EFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGFSTPFHFP
        +FSVD LLD SN D  L+  +    +           + Q  R S   DL S P  + P  DL +LEWLS+FVEDSFS       FP
Subjt:  EFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGFSTPFHFP

O82632 GATA transcription factor 93.6e-0831.68Show/hide
Query:  ELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDK---HSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF
        +++PEL     N    D F VD LLDFSN D  +     DDG      S++LS        + +S+ TD        +P DD+A LEWLS+FVE+SF+G 
Subjt:  ELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDK---HSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF

Query:  STPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTSYS
               F   G+ +   + +      +   E   +F+        +P +ARSKR+R++ S
Subjt:  STPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTSYS

Q9FH57 GATA transcription factor 55.3e-1236.71Show/hide
Query:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST
        N  S D+FSVD LLD SN D F   +T    D  +    + +S+++       + R+S  +   D  SLP++E  LPADDLANLEWLS FVEDSF+ +S 
Subjt:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST

Query:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR
        P     P    + L             TG+++           F+ P+P +ARSKR R
Subjt:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR

Q9SD38 GATA transcription factor 61.8e-0434.78Show/hide
Query:  SSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHR-NSIVTDLPSLPSTELPADDLANLEWLSDFVED-SFSGFSTPFHFP
        + D+FSVD LLDFS  ++       D+ +              +HR N   T         +P DD+A LEWLS+FV+D SF+ +S P + P
Subjt:  SSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHR-NSIVTDLPSLPSTELPADDLANLEWLSDFVED-SFSGFSTPFHFP

Arabidopsis top hitse value%identityAlignment
AT3G51080.1 GATA transcription factor 61.3e-0534.78Show/hide
Query:  SSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHR-NSIVTDLPSLPSTELPADDLANLEWLSDFVED-SFSGFSTPFHFP
        + D+FSVD LLDFS  ++       D+ +              +HR N   T         +P DD+A LEWLS+FV+D SF+ +S P + P
Subjt:  SSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHR-NSIVTDLPSLPSTELPADDLANLEWLSDFVED-SFSGFSTPFHFP

AT4G32890.1 GATA transcription factor 92.5e-0931.68Show/hide
Query:  ELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDK---HSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF
        +++PEL     N    D F VD LLDFSN D  +     DDG      S++LS        + +S+ TD        +P DD+A LEWLS+FVE+SF+G 
Subjt:  ELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDK---HSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGF

Query:  STPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTSYS
               F   G+ +   + +      +   E   +F+        +P +ARSKR+R++ S
Subjt:  STPFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTSYS

AT4G36240.1 GATA transcription factor 76.9e-0740.23Show/hide
Query:  EFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGFSTPFHFP
        +FSVD LLD SN D  L+  +    +           + Q  R S   DL S P  + P  DL +LEWLS+FVEDSFS       FP
Subjt:  EFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGFSTPFHFP

AT5G66320.1 GATA transcription factor 53.8e-1336.71Show/hide
Query:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST
        N  S D+FSVD LLD SN D F   +T    D  +    + +S+++       + R+S  +   D  SLP++E  LPADDLANLEWLS FVEDSF+ +S 
Subjt:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST

Query:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR
        P     P    + L             TG+++           F+ P+P +ARSKR R
Subjt:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR

AT5G66320.2 GATA transcription factor 53.8e-1336.71Show/hide
Query:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST
        N  S D+FSVD LLD SN D F   +T    D  +    + +S+++       + R+S  +   D  SLP++E  LPADDLANLEWLS FVEDSF+ +S 
Subjt:  NVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQ-------IHRNSIVT---DLPSLPSTE--LPADDLANLEWLSDFVEDSFSGFST

Query:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR
        P     P    + L             TG+++           F+ P+P +ARSKR R
Subjt:  PFHFPFPCPGISSLMKSSNQSRCRRRTTGEQRF---RFVSGALFQDPIPVRARSKRTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGTTGAATTAAGCCCCGAACTCTGTTTTAATCCCCACAATGTTGTCTCCTCCGATGAATTTTCCGTCGACCAACTCCTGGATTTCTCTAACCATGAT
GATTTTCTTCAACACCAAACCCCCGACGACGGTGATAAGCACTCTACTTCCCTCTCCATTGCTATTTCTGCTCAACAAATTCATCGCAACTCCATTGTTACCGAT
CTTCCTTCTTTACCCTCCACCGAGCTTCCGGCGGACGATTTGGCCAACCTCGAATGGTTGTCCGATTTCGTTGAGGATTCTTTCTCTGGATTCTCCACTCCCTTT
CACTTTCCCTTTCCCTGTCCTGGAATTTCTTCCCTGATGAAATCGTCCAACCAAAGCCGCTGCCGTAGACGAACGACTGGAGAACAACGGTTCCGTTTCGTTTCC
GGAGCCCTGTTTCAAGACCCCATTCCGGTTAGGGCTAGAAGCAAACGGACGAGAACCTCCTACAGTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGTTGAATTAAGCCCCGAACTCTGTTTTAATCCCCACAATGTTGTCTCCTCCGATGAATTTTCCGTCGACCAACTCCTGGATTTCTCTAACCATGAT
GATTTTCTTCAACACCAAACCCCCGACGACGGTGATAAGCACTCTACTTCCCTCTCCATTGCTATTTCTGCTCAACAAATTCATCGCAACTCCATTGTTACCGAT
CTTCCTTCTTTACCCTCCACCGAGCTTCCGGCGGACGATTTGGCCAACCTCGAATGGTTGTCCGATTTCGTTGAGGATTCTTTCTCTGGATTCTCCACTCCCTTT
CACTTTCCCTTTCCCTGTCCTGGAATTTCTTCCCTGATGAAATCGTCCAACCAAAGCCGCTGCCGTAGACGAACGACTGGAGAACAACGGTTCCGTTTCGTTTCC
GGAGCCCTGTTTCAAGACCCCATTCCGGTTAGGGCTAGAAGCAAACGGACGAGAACCTCCTACAGTCATTGA
Protein sequenceShow/hide protein sequence
MEYVELSPELCFNPHNVVSSDEFSVDQLLDFSNHDDFLQHQTPDDGDKHSTSLSIAISAQQIHRNSIVTDLPSLPSTELPADDLANLEWLSDFVEDSFSGFSTPF
HFPFPCPGISSLMKSSNQSRCRRRTTGEQRFRFVSGALFQDPIPVRARSKRTRTSYSH