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ClCG01G005780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G005780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein IDA-like
Genome locationCG_Chr01:6302441..6302686
RNA-Seq ExpressionClCG01G005780
SyntenyClCG01G005780
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.7e-0854.05Show/hide
Query:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
KAG6579701.1 hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1060.53Show/hide
Query:  SNAFLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD
        SNA LL   LL  L   S+ARP PAT   T+  P P+      TAFR  HQ+FSFLPKG PIPPSAPSKRHNS+VD
Subjt:  SNAFLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD
KGN51548.1 hypothetical protein Csa_008377 [Cucumis sativus]5.9e-1770.37Show/hide
Query:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]5.9e-0954.67Show/hide
Query:  FLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        F+LLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  FLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.7e-0854.05Show/hide
Query:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
TrEMBL top hitse value%identityAlignment
A0A059BFA1 Uncharacterized protein3.1e-0854.88Show/hide
Query:  AFLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        AF LLLLLL      +AARP P TTT M P   P H   + P  TAFRH   IFS+LPKG  +PPS PS RHNS ++S P N
Subjt:  AFLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A0A0KPP8 Uncharacterized protein2.8e-1770.37Show/hide
Query:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A0A0KR07 Uncharacterized protein2.8e-0954.67Show/hide
Query:  FLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        F+LLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  FLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A5A7SV51 Putative Membrane lipoprotein8.3e-0954.05Show/hide
Query:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A5D3CCP4 Putative Membrane lipoprotein8.3e-0954.05Show/hide
Query:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  LLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA7.0e-0545.12Show/hide
Query:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  ++ LA +S   AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein5.0e-0645.12Show/hide
Query:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  ++ LA +S   AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
AT5G64667.1 inflorescence deficient in abscission (IDA)-like 26.1e-0434.85Show/hide
Query:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL
        +LLLL++ L F + AR         P   HN   +++ +   Q   FLP+ FP+P S PS++HN +
Subjt:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCTTCTTCTAATTCCCCTTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCG
CCGTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACGGTCATCAAATCTTCAGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGA
CACAACTCGCTCGTTGACTCCGCCCCCCGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCTTCTTCTAATTCCCCTTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCG
CCGTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACGGTCATCAAATCTTCAGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGA
CACAACTCGCTCGTTGACTCCGCCCCCCGAAACTGA
Protein sequenceShow/hide protein sequence
MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN