; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G006430 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G006430
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionF-box protein SKIP28
Genome locationCG_Chr01:7234870..7237228
RNA-Seq ExpressionClCG01G006430
SyntenyClCG01G006430
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046341.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa]4.9e-14082.51Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]1.7e-14081.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  +QQE RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_008467113.1 PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]5.2e-14278.79Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

XP_016903294.1 PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]2.9e-14083.11Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]7.8e-15488.74Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEP NPAA AGSS  GVR+EAGPPHEALFLVLSYLPLFELLSM +VCVSLRDAVEHDVLPWLHI+VDRRLSSRLSDY LGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKL
        NCFKISDSG HEVVEKNPLLTKLYVPGCTSLTP GVVRAV+TLSQHSHNLKSLMIGGIYNIEN+HLEVLKCHL +NRS QQQ+ERQ HHLY EHIDRSKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKL

Query:  LCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI
        L NEFQPVIDVQICPKC +IR+VYDCSRERCKIKQE+Q L DCRGCI C+PRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNR YCTRH  N+
Subjt:  LCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI

Query:  ET
         +
Subjt:  ET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein8.1e-14181.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  +QQE RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A1S3CSR5 F-box protein SKIP28 isoform X22.5e-14278.79Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

A0A1S4E4Z1 F-box protein SKIP28 isoform X11.4e-14083.11Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

A0A5A7TYB5 F-box protein SKIP28 isoform X12.4e-14082.51Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQE RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQE-RQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A6J1FGL5 F-box protein SKIP282.5e-13478.62Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSEN + PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH++VDR LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKL
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL KNRSQQQQQ++Q    +HEHI+ SKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKL

Query:  LCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI
        L N++  +IDV++CPKC +I  VYDCSRERCKIKQE+++  +CRGC  CVPRCEECGGCVD DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRH  N+
Subjt:  LCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI

Query:  ETRS
         + S
Subjt:  ETRS

SwissProt top hitse value%identityAlignment
A2RT62 F-box/LRR-repeat protein 162.8e-0526.98Show/hide
Query:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN
        C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   
Subjt:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN

Query:  LKSLMIGGIYNIENQHLEVLKCHLFK
        L+SL +     I +  LE + C L +
Subjt:  LKSLMIGGIYNIENQHLEVLKCHLFK

Q5MJ12 F-box/LRR-repeat protein 162.8e-0526.98Show/hide
Query:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN
        C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   
Subjt:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN

Query:  LKSLMIGGIYNIENQHLEVLKCHLFK
        L+SL +     I +  LE + C L +
Subjt:  LKSLMIGGIYNIENQHLEVLKCHLFK

Q9LK24 F-box protein At3g272901.6e-2935.55Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNV
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     Q+ ++  +       RS+    E   V D++ICP C     V
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNV

Query:  YDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC
        +DC  + C +K Q   +   CR C+ C+ RC ECG C++D E  +  C    C  C
Subjt:  YDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC

Q9LU91 F-box protein SKIP144.6e-3232.68Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS
        T +T  G++  +  L S     +K L + G++ +   H + L   L  N   + +Q  Q    YH     + + C++    +D+++CPKC + + VYDC 
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS

Query:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
         E CK K++     +CR C  C+ RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

Q9ZU90 F-box protein SKIP289.5e-5440.71Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                                +  ID+++CPKC ++R +  CS
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS

Query:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
        RE C  KQ +     CRGC  C+PRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein6.8e-5540.71Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                                +  ID+++CPKC ++R +  CS
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS

Query:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
        RE C  KQ +     CRGC  C+PRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

AT3G26000.1 Ribonuclease inhibitor3.3e-3332.68Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS
        T +T  G++  +  L S     +K L + G++ +   H + L   L  N   + +Q  Q    YH     + + C++    +D+++CPKC + + VYDC 
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCS

Query:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
         E CK K++     +CR C  C+ RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  RERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein1.2e-3035.55Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNV
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     Q+ ++  +       RS+    E   V D++ICP C     V
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNV

Query:  YDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC
        +DC  + C +K Q   +   CR C+ C+ RC ECG C++D E  +  C    C  C
Subjt:  YDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGG
AGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATA
AGGAATGTTTACGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGG
TGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCA
CGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGG
GAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGG
AGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATA
AGGAATGTTTACGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGG
TGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCA
CGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGG
GAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA
Protein sequenceShow/hide protein sequence
MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGL
HEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDI
RNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNIETRSPCLHFLYLAKERCKAGLQQDMLCLNR
ENVNLAERKENCKHIQVYKFGLSNYCARTV