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ClCG01G006880 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G006880
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionnon-specific lipid-transfer protein-like
Genome locationCG_Chr01:7999189..8001836
RNA-Seq ExpressionClCG01G006880
SyntenyClCG01G006880
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0009627 - systemic acquired resistance (biological process)
GO:0005504 - fatty acid binding (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR039265 - Putative lipid-transfer protein DIR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067590.1 protein YLS3 [Cucumis melo var. makuwa]2.5e-4381.67Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI
        MGSFS ASK +IVG+ VI+LV W+     VGAA GECGKTPIESAA GLTPCLGAVRD KAKVT ACC+KVGAMFNSSPKCLCAILLSPLAKQ GINP I
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI

Query:  AITVPKRCNIRNRPVGKKCG
        AIT+PKRCNIRNRP GKKCG
Subjt:  AITVPKRCNIRNRPVGKKCG

XP_004151148.1 protein YLS3 [Cucumis sativus]1.5e-4883.87Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        MGSFS ASK +IVG+ VI+LV W+     VGAAGECGKTPIESAA GLTPCLGAVRD KAKVT ACCSKVGAMFNSSPKCLCAILLSPLAKQ GINP IA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

XP_016903714.1 PREDICTED: protein YLS3 [Cucumis melo]2.5e-4381.67Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI
        MGSFS ASK +IVG+ VI+LV W+     VGAA GECGKTPIESAA GLTPCLGAVRD KAKVT ACC+KVGAMFNSSPKCLCAILLSPLAKQ GINP I
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI

Query:  AITVPKRCNIRNRPVGKKCG
        AIT+PKRCNIRNRP GKKCG
Subjt:  AITVPKRCNIRNRPVGKKCG

XP_022962902.1 non-specific lipid transfer protein GPI-anchored 2 [Cucurbita moschata]1.3e-4477.42Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        M SFS  SK LIV V VIL+ S +G IA  GAAGECGKTP+ESAA GLTPCL A RDA+AKV+ ACCS+V AMFN+SPKCLCAILLSP++KQ GINPAIA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

XP_023516114.1 non-specific lipid transfer protein GPI-anchored 2 [Cucurbita pepo subsp. pepo]6.6e-4476.61Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        M SFS  S  LIV V VIL+ S +G IA  GAAGECGKTP+ESAA GLTPCL A RDA+AKV+ ACCS+V AMFN+SPKCLCAILLSP++KQ GINPAIA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

TrEMBL top hitse value%identityAlignment
A0A0A0KJJ0 AAI domain-containing protein7.3e-4983.87Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        MGSFS ASK +IVG+ VI+LV W+     VGAAGECGKTPIESAA GLTPCLGAVRD KAKVT ACCSKVGAMFNSSPKCLCAILLSPLAKQ GINP IA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

A0A1S4E669 protein YLS31.2e-4381.67Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI
        MGSFS ASK +IVG+ VI+LV W+     VGAA GECGKTPIESAA GLTPCLGAVRD KAKVT ACC+KVGAMFNSSPKCLCAILLSPLAKQ GINP I
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI

Query:  AITVPKRCNIRNRPVGKKCG
        AIT+PKRCNIRNRP GKKCG
Subjt:  AITVPKRCNIRNRPVGKKCG

A0A5A7VK87 Protein YLS31.2e-4381.67Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI
        MGSFS ASK +IVG+ VI+LV W+     VGAA GECGKTPIESAA GLTPCLGAVRD KAKVT ACC+KVGAMFNSSPKCLCAILLSPLAKQ GINP I
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAA-GECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAI

Query:  AITVPKRCNIRNRPVGKKCG
        AIT+PKRCNIRNRP GKKCG
Subjt:  AITVPKRCNIRNRPVGKKCG

A0A6J1HDU2 non-specific lipid transfer protein GPI-anchored 26.4e-4577.42Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        M SFS  SK LIV V VIL+ S +G IA  GAAGECGKTP+ESAA GLTPCL A RDA+AKV+ ACCS+V AMFN+SPKCLCAILLSP++KQ GINPAIA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

A0A6J1JLA4 non-specific lipid transfer protein GPI-anchored 27.9e-4371.77Show/hide
Query:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA
        M SFS  SK  ++  + ++LV+ +G IA   AAGECGKTP+ESAA GLTPCL A RDA+AKV+ ACCS+V AMFN+SPKCLCAILLSP++KQ GINPAIA
Subjt:  MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIA

Query:  ITVPKRCNIRNRPVGKKCGKYTLP
        IT+PKRCNIRNRP GKKCGKYTLP
Subjt:  ITVPKRCNIRNRPVGKKCGKYTLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.8e-3259.63Show/hide
Query:  LVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVG
        L+ LL+S    +A V AAGECG+ PI  AAA L+PCL A ++ + KV   CC+KVGA+  ++P+CLCA++LSPLAK+ GINP IAI VPKRCNIRNRP G
Subjt:  LVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVG

Query:  KKCGKYTLP
        K+CG+Y +P
Subjt:  KKCGKYTLP

AT3G53980.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.2e-2447.79Show/hide
Query:  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRN
        I+G+++++    DG       AGECG++  ++ A  L PC GA +DA + V   CC+++   F+ +PKCLCAILLS  AK  G++P +A+T+PKRCN  N
Subjt:  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRN

Query:  RPVGKKCGKYTLP
        RPVG KCG YTLP
Subjt:  RPVGKKCGKYTLP

AT3G53980.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.2e-2447.79Show/hide
Query:  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRN
        I+G+++++    DG       AGECG++  ++ A  L PC GA +DA + V   CC+++   F+ +PKCLCAILLS  AK  G++P +A+T+PKRCN  N
Subjt:  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRN

Query:  RPVGKKCGKYTLP
        RPVG KCG YTLP
Subjt:  RPVGKKCGKYTLP

AT5G05960.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-2350Show/hide
Query:  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPV
        +LV+ + S   ++ G   AGECG+ P +  A  L PC  A +D  AKV+A CC++V  M   +PKCLCA++LS  A+  G  P I++T+PKRCNI NRPV
Subjt:  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPV

Query:  GKKCGKYTLP
        G KCG YTLP
Subjt:  GKKCGKYTLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCCTTCTCCGGTGCTTCAAAAGCTCTAATTGTGGGTGTGTTAGTGATCCTTCTTGTGAGTTGGGATGGTTTGATTGCCGGAGTTGGGGCAGCCGGAGAGTGTGG
GAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGACGCCGTGCCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGT
TTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCTCCTTTGGCTAAGCAGGTGGGAATAAACCCCGCCATTGCCATTACAGTCCCCAAGCGCTGCAACATCAGA
AACCGGCCTGTCGGCAAGAAGTGCGGAAAGTACACTCTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
AATACCGAATCAAAAACCAAGCAAGAGTGTGTTAAAACGCAAATTAATTAGGTAATAATTAAATTTAAGGATTGGTAATGGGGTCCTTCTCCGGTGCTTCAAAAGCTCTA
ATTGTGGGTGTGTTAGTGATCCTTCTTGTGAGTTGGGATGGTTTGATTGCCGGAGTTGGGGCAGCCGGAGAGTGTGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCT
GACGCCGTGCCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTC
TTCTTTCTCCTTTGGCTAAGCAGGTGGGAATAAACCCCGCCATTGCCATTACAGTCCCCAAGCGCTGCAACATCAGAAACCGGCCTGTCGGCAAGAAGTGCGGAAAGTAC
ACTCTCCCTTGAGAACTAAAGTATAGCTACTCACAGCCACATGAAAAAAGTCGTTATGTTATAATTATGTCACATCATATTTCTGTACCCTAATAAATTAATATATATAT
CCATCGCAGTCAATGTCTAATGTTTGAGTTGTTTATTTTATATTTACATTATGTTTGTGGGGCTTACACTTGTTACTATGGGTGTAGTATAATAATGAGTCCCAAATTGT
CTTTTTAGTAAGAGGAGAGTGAATAAATATTTTTATGCTATGCTTGGCTCATAAACACATTCACATGTGTTTCAAATCACAACTTATTACCC
Protein sequenceShow/hide protein sequence
MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIR
NRPVGKKCGKYTLP