CuGenDBv2

Gene ID	ClCG01G007105
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Cytochrome f
Genome location	CG_Chr01:8177636..8178350
RNA-Seq Expression	ClCG01G007105
Synteny	ClCG01G007105
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0022900 - electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0031361 - integral component of thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR002325 - Cytochrome f IPR011054 - Rudiment single hybrid motif IPR036826 - Cytochrome f large domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF9825355.1 hypothetical protein H0E87_005077 [Populus deltoides]

2.6e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

QHB75976.1 cytochrome f [Cucumis melo subsp. melo]

2.6e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

YP_004841796.1 cytochrome f [Cucumis melo subsp. melo]

2.6e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

YP_009326002.1 cytochrome f [Citrullus lanatus]

2.6e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

YP_009752003.1 cytochrome f [Cionosicys macranthus]

2.6e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE85 Cytochrome f

1.3e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

A0A1S4EU17 Cytochrome f

1.3e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

A0A1X9Q151 Cytochrome f

1.3e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

A0A218KG41 Cytochrome f

1.3e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

A0A249RZB7 Cytochrome f

1.3e-29

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

SwissProt top hits

e value

%identity

Alignment

A1E9T7 Cytochrome f

5.0e-31

91.67

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DA++GRQV+DIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQ+
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

P05151 Cytochrome f

5.0e-31

91.67

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DA++GRQV+DIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQ+
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

Q2QD76 Cytochrome f

3.4e-32

97.22

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

Q6ENV1 Cytochrome f

5.0e-31

91.67

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DA++GRQV+DIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQ+
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

Q6L387 Cytochrome f

5.0e-31

91.67

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DA++GRQV+DIIPPGPELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQ+
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

Arabidopsis top hits

e value

%identity

Alignment

ATCG00540.1 photosynthetic electron transfer A

4.8e-29

86.11

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Query:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI
        +DA+NGR+V+DIIP G ELLVSEGESIKLDQPLTSN NVGGFGQGDAEIVLQDPLRVQGLLFF  SV+LAQI
Subjt:  MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQI

Sequences

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CDS sequence

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ATGGATGCAGCGAATGGGCGTCAAGTGGTTGATATTATCCCTCCAGGACCAGAACTTCTTGTTTCAGAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCT
TAATGTGGGAGGATTTGGTCAGGGAGATGCAGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTTTGCATCTGTTATTTTGGCACAAATCCAAA
ATAATCCACCCCCCGAGTATATGCTTCAACAGGAAGGATTGGCGACTTACCCATTCAATGACTTTGGCACTGGACGTTCCAAAAATGGGGTACTATCGGGTCGGGTGAAT
TCAATAATAGAGGCCTGTTGGCATTCCAGCCTTCCTTCTCCTTTCAGGGCCTACCTGAAAGAGAATCCAGTGTTTCTTGGTCGTGAATATCTGAATAGGACGAACCGCCT
CGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGTTGAACTCCCAATTCTCGGGCAAATACAACCCTTTTTCATCATTTCTTCGCATTGTTTTCAAGCTCGGAA
ACAATAATCGATCAATAATTGATAAGTCTCGTTTCATCGATCAATTATTGGTTAACGATGTCCCTTCTTTCTAA

mRNA sequence

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Protein sequence

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MDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNLNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQIQNNPPPEYMLQQEGLATYPFNDFGTGRSKNGVLSGRVN
SIIEACWHSSLPSPFRAYLKENPVFLGREYLNRTNRLVVCFGTKQLELGSLNSQFSGKYNPFSSFLRIVFKLGNNNRSIIDKSRFIDQLLVNDVPSF

ClCG01G007105 (gene) of Watermelon (Charleston Gray) v2.5 genome