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ClCG01G007560 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G007560
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein SIS2
Genome locationCG_Chr01:8628085..8630052
RNA-Seq ExpressionClCG01G007560
SyntenyClCG01G007560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4985.07Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+ P RAFF PS  SP VRFS  PSA+R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDEENKD  SEISFE KPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

XP_004140287.1 uncharacterized protein LOC101209610 [Cucumis sativus]1.5e-4987.31Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS  P+APPR FF PS FSPPVRF A+PS SRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDE+  +DGSEISFEEKP +PRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

XP_008465810.1 PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]9.3e-5288.06Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS  P+APPRAFF P +FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDE+ + DG+EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]5.1e-5085.82Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+ P RAFF PS  SP VRFS  PSA+R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDEENKD  SEISFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]1.1e-5290.3Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MA+LLISTR FPFS   VAPPRAFF PS+FSP V FS +PS SR LRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein7.2e-5087.31Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS  P+APPR FF PS FSPPVRF A+PS SRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDE+  +DGSEISFEEKP +PRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

A0A1S3CQ37 uncharacterized protein LOC1035034024.5e-5288.06Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS  P+APPRAFF P +FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        EEDE+ + DG+EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447534.3e-4783.7Show/hide
Query:  MARLLISTR-LFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP S  PVAP RAFF PS  SP VRF    SA +TLR+VTTRAGASTSSYIFAFSIP SL+L+T LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTR-LFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSEISFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGS ISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSEISFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623103.6e-4984.96Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+ P RAFF PS  SP VRFS  PSA+R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAE
        EEDEENKD  SEI FEEKPALPRTRNRPKREAE
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874913.9e-4885.61Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF   P+ P RAFF PS  SP VRFS  PSA+RTLRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEISFEEKPALPRTRNRPKREA
        EEDEENKD  SEISFEEKPALPRTRNRPKREA
Subjt:  EEDEENKDDGSEISFEEKPALPRTRNRPKREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1535.7e-1545Show/hide
Query:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSA-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEEL
        MARL +S    P  P  ++ P +   P   SPP        A     +R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++
Subjt:  MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSA-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEEL

Query:  ALNQAI--MEEDEENKDDGSEISFEEKPALPRTRNRPKRE
        ALNQAI   E+ E  + D S     ++P L RTRNRPKRE
Subjt:  ALNQAI--MEEDEENKDDGSEISFEEKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGGCTCCTTATCTCGACCCGACTCTTTCCCTTTTCCCCTCCCCCCGTCGCTCCGCCGCGGGCATTCTTCACGCCCTCCAGTTTTTCGCCGCCGGTCAGATTCTC
CGCCCACCCATCCGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATCCCTTTATCTCTTATTCTCATCA
CTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAACAAAGATGATGGT
TCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGAGAAGCTGAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCCAATTACTATGGCTAGGCTCCTTATCTCGACCCGACTCTTTCCCTTTTCCCCTCCCCCCGTCGCTCCGCCGCGGGCATTCTTCACGCCCTCCAGTTTTTCGCCGCC
GGTCAGATTCTCCGCCCACCCATCCGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATCCCTTTATCTC
TTATTCTCATCACTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAAC
AAAGATGATGGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGAGAAGCTGAAGTTTAAATAAATTGCATAGTTTTTTTGGA
GGTGAACATATGATCGGATCAGACGGCTGAGAAATGGCTCAAGGAACTAGGAAATTTCCATGTAGTATATTGTATGTAATTTTTTTTCCCTTAATAATGATTAGTAAAAT
AATTAGTTGGTATGCTGATTAAGTTTGATATTTAATTATATTGTTACATATTCTTCAAATTGAAATATTTTTC
Protein sequenceShow/hide protein sequence
MARLLISTRLFPFSPPPVAPPRAFFTPSSFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEENKDDG
SEISFEEKPALPRTRNRPKREAEV