| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025159.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-86 | 34.01 | Show/hide |
Query: RIAAPRRLVTQVRAYTKSRPSSLRKKNMMKKKGKGKTTA-SFKGKKKTKLRKKY-----------------------KETSSWKQLRDGEITLKVRLGEI
+I +V R + S S + + + K KG T A KGK K +++KY +ETSS+KQL + E+TLKV G++
Subjt: RIAAPRRLVTQVRAYTKSRPSSLRKKNMMKKKGKGKTTA-SFKGKKKTKLRKKY-----------------------KETSSWKQLRDGEITLKVRLGEI
Query: ISAKT-------------------------LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-----------
ISA+ L+D SLPPCESCLEGK+TK F+EKG RAKE LEL+HSDLCG MN+ ARGG + I F
Subjt: ISAKT-------------------------LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-----------
Query: -------------EYDS------------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPA
EY + SKSV ETP+ELWRG K SL FRIWGCP
Subjt: -------------EYDS------------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPA
Query: HVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG---------------------
HVLV + KKL+ RS LC FVGYPKET+GGLF+DPQENRV VS NATFLEE+H+R+H+PR KL++ KS+ +D VG
Subjt: HVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG---------------------
Query: ------------ELFINPTIT-------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-----------
++ T T W+KAMDLE+ESMYFN VW+LVD GVKPIGCKWIYKRKRD
Subjt: ------------ELFINPTIT-------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-----------
Query: ------------------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------
DYEIWQMDVKT FLNG+LE+SI+M++ EGF+ +GQE+K+
Subjt: ------------------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------
Query: --------------------------------------------------------------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVS
PQ+VED+R I Y SAV SLMYA+LCTR DICY V IVS
Subjt: --------------------------------------------------------------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVS
Query: KYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
+YQ N DHW ++ R T+D L+ +D
Subjt: KYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
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| KAA0033228.1 gag/pol protein [Cucumis melo var. makuwa] | 4.5e-88 | 36.06 | Show/hide |
Query: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAK-----------------TLEDYSLPPCESCLEGKITKSFVFSEKG
K ++KKK +G T + +ETSS+KQL + E+TLKV G++ISA+ LED SLPPCESCLEGK+TK F+ KG
Subjt: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAK-----------------TLEDYSLPPCESCLEGKITKSFVFSEKG
Query: LRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS----------------------------------------
RAKE LEL+H DLCGPMN+ ARGG + I F EY +
Subjt: LRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS----------------------------------------
Query: ---------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFV
SKSV ETP+ELWRG K SL F+IWGC AHVLV + KKLE RS LC FV
Subjt: ---------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFV
Query: GYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTITW----WIKAMDLEIESMYFNFVWKLVDQSNG
GYPKET+GGLF+DPQEN+V VSKNATFLEE+H+RDH+PR KL++ KS+ D VG ++ T T W+KAMDLEIESMYFN +W+LVD G
Subjt: GYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTITW----WIKAMDLEIESMYFNFVWKLVDQSNG
Query: VKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------
V+PIGCKWIYKRKRD +YEIWQMDVKT FLNG+LE+SI+M+Q +GF+ QGQE+K+
Subjt: VKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------
Query: -----------------------------------------------------------------------------------------PQKVEDIRCIT
P +VED+R I
Subjt: -----------------------------------------------------------------------------------------PQKVEDIRCIT
Query: YTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKE
Y SAV SLM+A+LCTR DICY V IVS+YQ N DHW ++ R T+D L+ K+
Subjt: YTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKE
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| KAA0039205.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-96 | 42.7 | Show/hide |
Query: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKY---------KETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LE
SS KK +K+GKGK A KGK K ++ K+ +ETSS KQL + E+TLKV G++ISA+ LE
Subjt: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKY---------KETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LE
Query: DYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF--EYDSSK------------------------------SVLET
D SLPPCESCLEGK+TK + K RAKESLEL+HSDLCGPMN+ ARGG + I F +Y S K S
Subjt: DYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF--EYDSSK------------------------------SVLET
Query: PYE--------------LWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLV
P + LWRG K SL FRIWGCPAHVLV++ KKLE RS LC F GYPKET+GGLF++PQENRV VS NATFLEE+H+RDH+PR KL++
Subjt: PYE--------------LWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLV
Query: EHILLKSSECLDVVG-ELFINPTIT-------------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-
+ +S+ +D VG ++ T T + +KAMDLE+ESMYFN VW+LVD GVKP GCKWIYKRKRD
Subjt: EHILLKSSECLDVVG-ELFINPTIT-------------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-
Query: --------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------------PQKVE
DYEIWQMDVKT LNG+LE+ I+M+Q EGF+ QGQE+K+ PQ+VE
Subjt: --------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------------PQKVE
Query: DIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE
D+R I+Y S V SL++A+LCTR DICY V IVS+YQ N DHW ++
Subjt: DIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE
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| KAA0066736.1 gag/pol protein [Cucumis melo var. makuwa] | 4.5e-88 | 36.85 | Show/hide |
Query: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKYK------------ETSSWKQLRDGEITLKVRLGEIISAKT------------------------
SS +K +K+GKGK KGK K ++KK K ETSS+KQL + E+TLKV +IISA+
Subjt: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKYK------------ETSSWKQLRDGEITLKVRLGEIISAKT------------------------
Query: -LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-------------------------------EYD------
LED SLPPCESCLEGK+TK F+ KG RAKE LEL+HSDLCGPMN+ ARGG + I F YD
Subjt: -LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-------------------------------EYD------
Query: -----------------------SSKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATF
SKSV ETP++LWRG K SL FRIWGCP H+LV + KKLE R LC FVGYPKET+ GLF+DPQENRV VS NATF
Subjt: -----------------------SSKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATF
Query: LEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIY
LEE+H+RDH+PR KL++ +S+ +D VG ++ T T W+KAM+LE+ES+YFN VW+LVD GVKPIGCKWIY
Subjt: LEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIY
Query: KRKRDQ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------------
KRKRD DYEIWQMDVKT FLNG+LE+ I+++QLEGF+ +GQE+K+
Subjt: KRKRDQ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------------
Query: ---------------------------------------------------------------------------------PQKVEDIRCITYTSAVRSL
PQ+VED+R I Y S V SL
Subjt: ---------------------------------------------------------------------------------PQKVEDIRCITYTSAVRSL
Query: MYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
MY +LCTR DICY V IVS+Y+ N D W ++ R T+D L+ +D
Subjt: MYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-84 | 36.54 | Show/hide |
Query: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LEDYSLPPCESCLEGKITK
K ++KKK K T + +ETSS+KQL D E+TLKV G++ISA+ L+D SLPPCESCLEGK+TK
Subjt: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LEDYSLPPCESCLEGKITK
Query: SFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS--------------------------------
F+ KG RAKE LEL+HSDLCGPMN+ ARGG + I F EY +
Subjt: SFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS--------------------------------
Query: -----------------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLER
SKSV ETP+ELWRG K SL FRIWGCPAHVLV + KKLE
Subjt: -----------------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLER
Query: RSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG---------------------------------
RS LC FVGYPKET+GGLF+DPQENRV VS NATFLEE+H+R+H+PR KL++ +S+ +D VG
Subjt: RSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG---------------------------------
Query: ELFINPTIT-------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-----------------------
++ T T W+KAMDLE+ESMYFN VW+LVD GVKPIGCKWIYKRKRD
Subjt: ELFINPTIT-------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-----------------------
Query: ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI---------------------------------PQKV
DYEIWQMDVKT FLNG+LE+SI+M+Q E F+ QGQE+K+ PQ+V
Subjt: ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI---------------------------------PQKV
Query: EDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSK
ED+R I Y SAV SLMYA+LCTR DICY V IVS+
Subjt: EDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRR6 Gag/pol protein | 2.2e-88 | 36.06 | Show/hide |
Query: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAK-----------------TLEDYSLPPCESCLEGKITKSFVFSEKG
K ++KKK +G T + +ETSS+KQL + E+TLKV G++ISA+ LED SLPPCESCLEGK+TK F+ KG
Subjt: KNMMKKKGKGKTTASFKGKKKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAK-----------------TLEDYSLPPCESCLEGKITKSFVFSEKG
Query: LRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS----------------------------------------
RAKE LEL+H DLCGPMN+ ARGG + I F EY +
Subjt: LRAKESLELVHSDLCGPMNINARGGRDCSIYF------------------------EYDS----------------------------------------
Query: ---------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFV
SKSV ETP+ELWRG K SL F+IWGC AHVLV + KKLE RS LC FV
Subjt: ---------------------------------------------------SKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFV
Query: GYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTITW----WIKAMDLEIESMYFNFVWKLVDQSNG
GYPKET+GGLF+DPQEN+V VSKNATFLEE+H+RDH+PR KL++ KS+ D VG ++ T T W+KAMDLEIESMYFN +W+LVD G
Subjt: GYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTITW----WIKAMDLEIESMYFNFVWKLVDQSNG
Query: VKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------
V+PIGCKWIYKRKRD +YEIWQMDVKT FLNG+LE+SI+M+Q +GF+ QGQE+K+
Subjt: VKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------
Query: -----------------------------------------------------------------------------------------PQKVEDIRCIT
P +VED+R I
Subjt: -----------------------------------------------------------------------------------------PQKVEDIRCIT
Query: YTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKE
Y SAV SLM+A+LCTR DICY V IVS+YQ N DHW ++ R T+D L+ K+
Subjt: YTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKE
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| A0A5A7T1D8 Gag/pol protein | 1.1e-84 | 35.76 | Show/hide |
Query: SHNRIAAPRRLVTQVRAYTKSRPSSLRKKNMMKKKGKGKTTASFKGK--------------KKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAKT--
+H+R AP ++ K R K + +GKGKT KGK K ++KK KE SS+KQL + E+TL V +G++ISA+
Subjt: SHNRIAAPRRLVTQVRAYTKSRPSSLRKKNMMKKKGKGKTTASFKGK--------------KKTKLRKKYKETSSWKQLRDGEITLKVRLGEIISAKT--
Query: -----------------------LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYFEYDSS-------------
LED SLPPCESCL+GK+TK F+ KG RAKE LEL++SDLCGPMN+ ARGG +C I F D S
Subjt: -----------------------LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYFEYDSS-------------
Query: -----------------------------------------------------------------KSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDK
SV ETP+ELWRG K SL F+IWGCPAHVL +
Subjt: -----------------------------------------------------------------KSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDK
Query: KKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT------------------
KKLE RS LC F+GYPKET+GGLF+DPQENRV VS NATFLEE+H+RDH+ R KL++ + +S+ ++ VG ++ T T
Subjt: KKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT------------------
Query: ---WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI
W KAMDLE+ESMYFN VW+LVD GVKPIGCKWIYKRKRD DYEIWQMDVKT FLNG+LE+SI+M+Q EGF+ QGQ++K+
Subjt: ---WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDH
Q+VED+R I Y S V SLMY +LCTR DICY + IVS+YQ + DH
Subjt: ------------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDH
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| A0A5D3BH07 Gag/pol protein | 9.4e-84 | 37.35 | Show/hide |
Query: KETSSWKQLRDGEITLKVRLGEIISAKTLEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYFEYDSSK-------
+ETSS+KQL + E+TLKV G++ISA+ + D K F+EKG RAKE LEL+HSDLC PMN+ ARGG + I F D S+
Subjt: KETSSWKQLRDGEITLKVRLGEIISAKTLEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYFEYDSSK-------
Query: ------------------------------SVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSK
SV ETP+ELWRG K SL FRIWGCPAHVLV + KKLE RS LC FVGYPKET+GGLF+DPQ NRV VS
Subjt: ------------------------------SVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSK
Query: NATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGC
NATFLEE+H+RDH+PR KL++ +S+ +D VG +N T T W+KAMDLE+ESMYFN +W+LVD GVKPIGC
Subjt: NATFLEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGC
Query: KWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------
KWIYKRKRD DYEIWQMDVK +LN + E+SI+M+Q EGF+ QGQE+K+
Subjt: KWIYKRKRDQ---------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIERST
PQ+VED+R I Y SAV SLMY +LCT+SDI V IVS+YQ N DHW +ST
Subjt: ---------PQKVEDIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIERST
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| A0A5D3D4K7 Gag/pol protein | 4.8e-96 | 42.7 | Show/hide |
Query: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKY---------KETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LE
SS KK +K+GKGK A KGK K ++ K+ +ETSS KQL + E+TLKV G++ISA+ LE
Subjt: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKY---------KETSSWKQLRDGEITLKVRLGEIISAKT-------------------------LE
Query: DYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF--EYDSSK------------------------------SVLET
D SLPPCESCLEGK+TK + K RAKESLEL+HSDLCGPMN+ ARGG + I F +Y S K S
Subjt: DYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF--EYDSSK------------------------------SVLET
Query: PYE--------------LWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLV
P + LWRG K SL FRIWGCPAHVLV++ KKLE RS LC F GYPKET+GGLF++PQENRV VS NATFLEE+H+RDH+PR KL++
Subjt: PYE--------------LWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATFLEENHIRDHQPR-KLLV
Query: EHILLKSSECLDVVG-ELFINPTIT-------------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-
+ +S+ +D VG ++ T T + +KAMDLE+ESMYFN VW+LVD GVKP GCKWIYKRKRD
Subjt: EHILLKSSECLDVVG-ELFINPTIT-------------------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIYKRKRDQ-
Query: --------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------------PQKVE
DYEIWQMDVKT LNG+LE+ I+M+Q EGF+ QGQE+K+ PQ+VE
Subjt: --------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI------------------------------------------PQKVE
Query: DIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE
D+R I+Y S V SL++A+LCTR DICY V IVS+YQ N DHW ++
Subjt: DIRCITYTSAVRSLMYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE
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| A0A5D3DWJ5 Gag/pol protein | 2.2e-88 | 36.85 | Show/hide |
Query: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKYK------------ETSSWKQLRDGEITLKVRLGEIISAKT------------------------
SS +K +K+GKGK KGK K ++KK K ETSS+KQL + E+TLKV +IISA+
Subjt: SSLRKKNMMKKKGKGK---TTASFKGKKKTKLRKKYK------------ETSSWKQLRDGEITLKVRLGEIISAKT------------------------
Query: -LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-------------------------------EYD------
LED SLPPCESCLEGK+TK F+ KG RAKE LEL+HSDLCGPMN+ ARGG + I F YD
Subjt: -LEDYSLPPCESCLEGKITKSFVFSEKGLRAKESLELVHSDLCGPMNINARGGRDCSIYF-------------------------------EYD------
Query: -----------------------SSKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATF
SKSV ETP++LWRG K SL FRIWGCP H+LV + KKLE R LC FVGYPKET+ GLF+DPQENRV VS NATF
Subjt: -----------------------SSKSVLETPYELWRGHKGSLCLFRIWGCPAHVLVEDKKKLERRSTLCLFVGYPKETKGGLFYDPQENRVLVSKNATF
Query: LEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIY
LEE+H+RDH+PR KL++ +S+ +D VG ++ T T W+KAM+LE+ES+YFN VW+LVD GVKPIGCKWIY
Subjt: LEENHIRDHQPR-KLLVEHILLKSSECLDVVG-ELFINPTIT---------------------WWIKAMDLEIESMYFNFVWKLVDQSNGVKPIGCKWIY
Query: KRKRDQ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------------
KRKRD DYEIWQMDVKT FLNG+LE+ I+++QLEGF+ +GQE+K+
Subjt: KRKRDQ------------------------DYEIWQMDVKTTFLNGHLEDSIYMTQLEGFLEQGQEKKI-------------------------------
Query: ---------------------------------------------------------------------------------PQKVEDIRCITYTSAVRSL
PQ+VED+R I Y S V SL
Subjt: ---------------------------------------------------------------------------------PQKVEDIRCITYTSAVRSL
Query: MYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
MY +LCTR DICY V IVS+Y+ N D W ++ R T+D L+ +D
Subjt: MYAILCTRSDICYVVRIVSKYQFNSRYDHWNPIE------RSTKDQKLLKKEQD
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