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ClCG01G009760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G009760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrotransposon protein
Genome locationCG_Chr01:13926590..13927833
RNA-Seq ExpressionClCG01G009760
SyntenyClCG01G009760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]3.3e-1072.73Show/hide
Query:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN
        KH WSKVED +LVEALL+LVETGWR+DNGTF PGYL  L+ +L+
Subjt:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN

XP_038892629.1 uncharacterized protein At2g29880-like [Benincasa hispida]1.5e-1064.41Show/hide
Query:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN--VPNNDIGLSMMHN
        KH WSKVED KLVEALL+LVETGWR DNGTF PGYL  L+ +L+  VP    G ++ HN
Subjt:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN--VPNNDIGLSMMHN

XP_038895852.1 uncharacterized protein LOC120084021 [Benincasa hispida]3.3e-1072.73Show/hide
Query:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN
        KH WSKVED KL+EALL+LVETGWR+DNGTF PGYL  L+ +L+
Subjt:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]2.8e-0972.73Show/hide
Query:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN
        KH WSKVED KLVEALL+LVETGWR+DNGTF  GYL  L+ +L+
Subjt:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN

XP_038902479.1 uncharacterized protein At2g29880-like [Benincasa hispida]1.9e-1075Show/hide
Query:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN
        KH WSKVED KLVEALL+LVETGWR+DNGTF PGYL  L+ +L+
Subjt:  KHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLN

TrEMBL top hitse value%identityAlignment
A0A5A7U0H7 Retrotransposon protein3.1e-0661.36Show/hide
Query:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLL
        KHTW+K E+ K VE L+ LV + GWR+DNGTF PGYL QLQ ++
Subjt:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLL

A0A5A7U5I3 Retrotransposon protein1.1e-0642.67Show/hide
Query:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLLNVPNNDIGLSMMHNLSVNRKYKSE-YCSTKD
        KH W+ +ED  LVE LL LVE  GWRAD+GTF PGYL Q+Q L+    +   + +   L  ++ +K   +C ++D
Subjt:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLLNVPNNDIGLSMMHNLSVNRKYKSE-YCSTKD

A0A5D3CQS4 Retrotransposon protein3.1e-0654.72Show/hide
Query:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLL--NVPNNDI
        KHTW+K E+ KLVE L+ LV   GWR++NGTF PGYL QLQ ++   +P+ +I
Subjt:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLL--NVPNNDI

A0A5D3CWW4 Retrotransposon protein1.1e-0642.67Show/hide
Query:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLLNVPNNDIGLSMMHNLSVNRKYKSE-YCSTKD
        KH W+ +ED  LVE LL LVE  GWRAD+GTF PGYL Q+Q L+    +   + +   L  ++ +K   +C ++D
Subjt:  KHTWSKVEDVKLVEALLHLVET-GWRADNGTFNPGYLHQLQHLLNVPNNDIGLSMMHNLSVNRKYKSE-YCSTKD

A0A803QNC5 Uncharacterized protein1.8e-0650Show/hide
Query:  KKHTWSKVEDVKLVEALLHLVETG-WRADNGTFNPGYLHQLQHLLN--VPNNDI
        +KH W+ ++D KLVE L+ +  +G W+ADNGTF PGYL QL+ ++N  +PN+ I
Subjt:  KKHTWSKVEDVKLVEALLHLVETG-WRADNGTFNPGYLHQLQHLLN--VPNNDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACATACTTGGTCGAAAGTCGAAGATGTAAAGTTGGTCGAAGCGTTACTGCATTTGGTCGAGACTGGTTGGCGAGCTGATAATGGGACTTTCAACCCTGGCTA
TCTACACCAACTTCAACATTTGCTGAATGTTCCAAACAATGATATAGGGTTATCAATGATGCACAATTTAAGTGTTAACCGCAAGTATAAGTCCGAATATTGTTCCACTA
AGGATCCAATTGTGAAGCACCGTCACAATCTCCTTGGCTTTCACGTTGGAACTCGAATGGCACCACGACTCTCTCGAATTCTTTTCCTCTTCCTTGCAGCTAACTCACTC
TTTGAACTCTCTAATGAACTTTCACTCAATTCTCTCCTTCTTGTGTCTCTTTTGGTTTGTAGATTTGTGATTATGGTTGCTGGAAGCCCTCTTATTTATAGAATTGGCCG
CCCAAATTTCTTTCCAAAAATGCAAAATCTTCAAATTAGGAAAGCTGGCGCCGCAGCACTGACCGATATGGAAAGTTGGGGTCACGGTGCTGACCGTCATGGAAAGCTAC
CCTCGGTCACCGTGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACATACTTGGTCGAAAGTCGAAGATGTAAAGTTGGTCGAAGCGTTACTGCATTTGGTCGAGACTGGTTGGCGAGCTGATAATGGGACTTTCAACCCTGGCTA
TCTACACCAACTTCAACATTTGCTGAATGTTCCAAACAATGATATAGGGTTATCAATGATGCACAATTTAAGTGTTAACCGCAAGTATAAGTCCGAATATTGTTCCACTA
AGGATCCAATTGTGAAGCACCGTCACAATCTCCTTGGCTTTCACGTTGGAACTCGAATGGCACCACGACTCTCTCGAATTCTTTTCCTCTTCCTTGCAGCTAACTCACTC
TTTGAACTCTCTAATGAACTTTCACTCAATTCTCTCCTTCTTGTGTCTCTTTTGGTTTGTAGATTTGTGATTATGGTTGCTGGAAGCCCTCTTATTTATAGAATTGGCCG
CCCAAATTTCTTTCCAAAAATGCAAAATCTTCAAATTAGGAAAGCTGGCGCCGCAGCACTGACCGATATGGAAAGTTGGGGTCACGGTGCTGACCGTCATGGAAAGCTAC
CCTCGGTCACCGTGCCGTAG
Protein sequenceShow/hide protein sequence
MKKHTWSKVEDVKLVEALLHLVETGWRADNGTFNPGYLHQLQHLLNVPNNDIGLSMMHNLSVNRKYKSEYCSTKDPIVKHRHNLLGFHVGTRMAPRLSRILFLFLAANSL
FELSNELSLNSLLLVSLLVCRFVIMVAGSPLIYRIGRPNFFPKMQNLQIRKAGAAALTDMESWGHGADRHGKLPSVTVP