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ClCG01G009880 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G009880
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:14215686..14216453
RNA-Seq ExpressionClCG01G009880
SyntenyClCG01G009880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66828.1 hypothetical protein Csa_006838 [Cucumis sativus]1.8e-0992.31Show/hide
Query:  MLNPPCNCGSKARASVVKHVLCSLIKAGIRLSLLAGALT
        MLNPPCNCGSK RASVVKHVLCSLIKA IRL LLAGALT
Subjt:  MLNPPCNCGSKARASVVKHVLCSLIKAGIRLSLLAGALT
TrEMBL top hitse value%identityAlignment
A0A0A0LYG4 Uncharacterized protein8.5e-1092.31Show/hide
Query:  MLNPPCNCGSKARASVVKHVLCSLIKAGIRLSLLAGALT
        MLNPPCNCGSK RASVVKHVLCSLIKA IRL LLAGALT
Subjt:  MLNPPCNCGSKARASVVKHVLCSLIKAGIRLSLLAGALT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATTTTGGTGATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAGGAATTAGA
CTGTCTTTGTTGGCTGGTGCCTTAACAGGTAAGGTCTACTGGTGGAGTGGTGAGAATCAAATAGATGATCAGAACTTTTGGGCAAATTATGGGTTTCCTTTTTCC
CTGCCTAACCCTTTTGACAACGACATTCTTAACGTTGAAGCAAGAACTAAGCAGATGGTGGATACTTCTTCCCTGCTGTTTTATCAACAGGATATCCCAGAGAAG
AGATGCACATTAATGGCTCACGGAGCTAAGTTGGGGGTTTATGTTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATTTTGGTGATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAGGAATTAGA
CTGTCTTTGTTGGCTGGTGCCTTAACAGGTAAGGTCTACTGGTGGAGTGGTGAGAATCAAATAGATGATCAGAACTTTTGGGCAAATTATGGGTTTCCTTTTTCC
CTGCCTAACCCTTTTGACAACGACATTCTTAACGTTGAAGCAAGAACTAAGCAGATGGTGGATACTTCTTCCCTGCTGTTTTATCAACAGGATATCCCAGAGAAG
AGATGCACATTAATGGCTCACGGAGCTAAGTTGGGGGTTTATGTTCCCTAA
Protein sequenceShow/hide protein sequence
MPILVMLNPPCNCGSKARASVVKHVLCSLIKAGIRLSLLAGALTGKVYWWSGENQIDDQNFWANYGFPFSLPNPFDNDILNVEARTKQMVDTSSLLFYQQDIPEK
RCTLMAHGAKLGVYVP