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ClCG01G010190 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G010190
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationCG_Chr01:15279173..15279955
RNA-Seq ExpressionClCG01G010190
SyntenyClCG01G010190
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4076422.1 unnamed protein product [Lactuca saligna]7.8e-2775.95Show/hide
Query:  RSAYRGIEREELEPELVGLG---LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        RSAYRGIER++     +G G   LYWSYSYCAPCER+WIREGNR DV LTQPGNG EG AAWGMS SR KAHFELWVIG
Subjt:  RSAYRGIEREELEPELVGLG---LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

GEZ81354.1 putative late blight resistance protein homolog R1B-16 [Tanacetum cinerariifolium]3.2e-2085.19Show/hide
Query:  WSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        WSYSYCAPCER+WIREGNR DV LTQ GNG EG AAWGMS SR KAHFELWVIG
Subjt:  WSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

KAF3949550.1 hypothetical protein CMV_024588 [Castanea mollissima]1.3e-2185.71Show/hide
Query:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        LYWSY YCAPCER+WIREGNR DV LTQPGNG EG AAWGMS SR KAHFELWVIG
Subjt:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

QCD82339.1 cytochrome c oxidase subunit I [Vigna unguiculata]1.4e-2060.44Show/hide
Query:  SHLDSTRTFVPRSAYRGIEREELEPELVGLG---LYWSYSYCAPC-ERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        S  D+     P        +E+  PE VGLG   LYWSYSYCAPC ER+WIREGNR DV LTQPGNG EG AAWGM  SR KAHF   VIG
Subjt:  SHLDSTRTFVPRSAYRGIEREELEPELVGLG---LYWSYSYCAPC-ERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

TXG53445.1 hypothetical protein EZV62_022614 [Acer yangbiense]1.4e-2071.79Show/hide
Query:  VPRSAYRGIEREELEPELVGLGLYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        +PRSAYRGIERE+  PE VGLG      Y A   R+WIREGNR DV LTQPGNGLEG AAWGMS S  KAHFELWVIG
Subjt:  VPRSAYRGIEREELEPELVGLGLYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

TrEMBL top hitse value%identityAlignment
A0A4D6L1H3 Cytochrome c oxidase subunit 16.9e-2160.44Show/hide
Query:  SHLDSTRTFVPRSAYRGIEREELEPELVGLG---LYWSYSYCAPC-ERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        S  D+     P        +E+  PE VGLG   LYWSYSYCAPC ER+WIREGNR DV LTQPGNG EG AAWGM  SR KAHF   VIG
Subjt:  SHLDSTRTFVPRSAYRGIEREELEPELVGLG---LYWSYSYCAPC-ERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

A0A5C7HAC1 Uncharacterized protein6.9e-2171.79Show/hide
Query:  VPRSAYRGIEREELEPELVGLGLYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        +PRSAYRGIERE+  PE VGLG      Y A   R+WIREGNR DV LTQPGNGLEG AAWGMS S  KAHFELWVIG
Subjt:  VPRSAYRGIEREELEPELVGLGLYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

A0A6N2KCU0 Uncharacterized protein2.0e-2083.93Show/hide
Query:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        LYWSYSYCAPCER+WIREGNR DV LTQPGN  EG AAWGMS SR KA FELWVIG
Subjt:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

A0A6N2L9T7 Uncharacterized protein2.0e-2083.93Show/hide
Query:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        LYWSYSYCAPCER+WIREGNR DV LTQPGN  EG AAWGMS SR KA FELWVIG
Subjt:  LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

A0A6S7L3E4 Uncharacterized protein3.8e-2775.95Show/hide
Query:  RSAYRGIEREELEPELVGLG---LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG
        RSAYRGIER++     +G G   LYWSYSYCAPCER+WIREGNR DV LTQPGNG EG AAWGMS SR KAHFELWVIG
Subjt:  RSAYRGIEREELEPELVGLG---LYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGFAAWGMSTSRHKAHFELWVIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTGGGAAGCTGAGTTGCACGGTTCTTGCCTCCCTCCTTGGAGCTCGTCCATTCCTTGGGTGATCCCTTGCTCTCACGTTCGAGTATTTGCTCGTCGTTTAGG
CCATCACTCCCGGGGTTCTTCGCACCTGGATAGTACCAGGACCTTTGTGCCTCGATCCGCTTACAGAGGAATAGAAAGGGAAGAACTGGAGCCAGAGCTAGTTGGGTTGG
GTCTCTATTGGTCTTATTCTTATTGTGCACCTTGTGAGCGCATTTGGATTCGCGAAGGCAATCGCTTGGATGTTCTCCTAACCCAACCCGGGAATGGATTGGAGGGATTC
GCAGCATGGGGAATGTCCACATCTCGTCACAAGGCTCATTTTGAGTTGTGGGTCATAGGGGGGTTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTGGGAAGCTGAGTTGCACGGTTCTTGCCTCCCTCCTTGGAGCTCGTCCATTCCTTGGGTGATCCCTTGCTCTCACGTTCGAGTATTTGCTCGTCGTTTAGG
CCATCACTCCCGGGGTTCTTCGCACCTGGATAGTACCAGGACCTTTGTGCCTCGATCCGCTTACAGAGGAATAGAAAGGGAAGAACTGGAGCCAGAGCTAGTTGGGTTGG
GTCTCTATTGGTCTTATTCTTATTGTGCACCTTGTGAGCGCATTTGGATTCGCGAAGGCAATCGCTTGGATGTTCTCCTAACCCAACCCGGGAATGGATTGGAGGGATTC
GCAGCATGGGGAATGTCCACATCTCGTCACAAGGCTCATTTTGAGTTGTGGGTCATAGGGGGGTTTATCTGA
Protein sequenceShow/hide protein sequence
MVDWEAELHGSCLPPWSSSIPWVIPCSHVRVFARRLGHHSRGSSHLDSTRTFVPRSAYRGIEREELEPELVGLGLYWSYSYCAPCERIWIREGNRLDVLLTQPGNGLEGF
AAWGMSTSRHKAHFELWVIGGFI