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ClCG01G010960 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G010960
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:17183290..17184473
RNA-Seq ExpressionClCG01G010960
SyntenyClCG01G010960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042343.1 hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa]2.7e-3688.3Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        MDIQ K+LQHKDQITVVAAVSVVLSLFVY APRFLSILAFFWPLFASTAVLLV M AFGGGFQVG+E+HG+RAGEGILDYVAGRPE GENHY +
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

KAG6573520.1 hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3386.96Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        IQTKVLQHKDQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLVAM AFGGGFQVGTEVHG +AGE ILDYVAGRPEY E  Y +
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2676.04Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMV-AFGGGFQVGTEVHGVR-AGEGILDYVAGRPEYGENHYNF
        MD+QTKVLQ+KDQITVVAAVSVVLSLF          LAFFWPLFASTA LLV M+ AF GGFQVGT++HGVR AGEGILDYVAGRPEYG+NHY +
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMV-AFGGGFQVGTEVHGVR-AGEGILDYVAGRPEYGENHYNF

KAG7012637.1 hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3388.04Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        IQTKVLQHKDQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLVAM AFGGGFQVGTEVHG RAGE ILDYVAGRPEY E  Y +
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

KGN64996.1 hypothetical protein Csa_022896 [Cucumis sativus]2.1e-3689.36Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        MDI  KVLQHKDQ+TVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLV M AFGGGFQVGTE+HG+RAGEGILDYVAGRPE GENHY +
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

TrEMBL top hitse value%identityAlignment
A0A061GGG1 Uncharacterized protein2.5e-1953.19Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        MDIQ K++Q++   T+    S +++  +Y APR L+IL +FWPLFAST V LVA++AFGGG Q+ TEVHG +AG+G++DYVA RPE+ E    F
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

A0A0A0LYI8 Uncharacterized protein1.0e-3689.36Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        MDI  KVLQHKDQ+TVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLV M AFGGGFQVGTE+HG+RAGEGILDYVAGRPE GENHY +
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

A0A2N9EZM9 Uncharacterized protein1.1e-1962.07Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY
        MDI  K+LQ++  +T+ A V +VLSL +YAAPR ++ILAFFWPLFASTAVLL+A++AFGG  Q  TE HG +AG+GIL+YV G+PE+
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY

A0A396J444 Uncharacterized protein5.5e-1955.79Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY-GENHYNF
        M +  K+L+++ QIT+   +S+V SL +Y AP FL++LA+FWPLFAST V LVA++AFGG  +  TE HG +AGEG+LDYVAG+PE+  E+ YNF
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY-GENHYNF

A0A5D3CU44 Uncharacterized protein1.3e-3688.3Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF
        MDIQ K+LQHKDQITVVAAVSVVLSLFVY APRFLSILAFFWPLFASTAVLLV M AFGGGFQVG+E+HG+RAGEGILDYVAGRPE GENHY +
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein5.3e-0638.46Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQV---GTEVHGVRAG-----EGILDYVAG
        M+ + K+L+ K QI     +S++    V  +P FL++L++FWPLF STA+ L A+  F     +    T + G  AG     EGILDYV G
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQV---GTEVHGVRAG-----EGILDYVAG

AT4G16400.1 unknown protein4.8e-1544.55Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNFNLMKPC
        M+IQ K+++++    V   VSV+++  VYAAPR L+ILA+FWPLFASTA  L   + FGG  Q+  E      GE ++DYVAGRPE  ++H         
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNFNLMKPC

Query:  QISNNNLRND
            NNLR+D
Subjt:  QISNNNLRND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTGTATATGCAGCTCCTCGGTTTCTAAGTAT
TCTAGCTTTCTTTTGGCCTCTCTTTGCCTCCACAGCCGTACTCTTGGTGGCAATGGTCGCCTTTGGAGGCGGTTTCCAAGTTGGAACCGAAGTTCATGGTGTAAGAGCAG
GTGAAGGGATTCTAGATTATGTCGCAGGACGACCTGAATATGGGGAAAACCATTATAACTTTAATTTGATGAAGCCTTGTCAAATATCCAATAACAATCTACGAAATGAT
GGTGTTATCATATTATTAATCTGGATTGATAACAATGAGTTTCAATCTACTACGCTAGTGGACAAGGATCATACCTCATCCAATGCTCTACAAGAGTTATCGTCTGATGA
GAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTGTATATGCAGCTCCTCGGTTTCTAAGTAT
TCTAGCTTTCTTTTGGCCTCTCTTTGCCTCCACAGCCGTACTCTTGGTGGCAATGGTCGCCTTTGGAGGCGGTTTCCAAGTTGGAACCGAAGTTCATGGTGTAAGAGCAG
GTGAAGGGATTCTAGATTATGTCGCAGGACGACCTGAATATGGGGAAAACCATTATAACTTTAATTTGATGAAGCCTTGTCAAATATCCAATAACAATCTACGAAATGAT
GGTGTTATCATATTATTAATCTGGATTGATAACAATGAGTTTCAATCTACTACGCTAGTGGACAAGGATCATACCTCATCCAATGCTCTACAAGAGTTATCGTCTGATGA
GAGTTAG
Protein sequenceShow/hide protein sequence
MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVAMVAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYNFNLMKPCQISNNNLRND
GVIILLIWIDNNEFQSTTLVDKDHTSSNALQELSSDES