| GenBank top hits | e value | %identity | Alignment |
|---|
| KAB1227625.1 DNA-directed RNA polymerase subunit beta'' [Morella rubra] | 3.7e-121 | 48.92 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQP RDGHNKVYK F ETLLGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K S+ + L+++ +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR----------------------------------------------------VQDAEQQSLILEKHPHYGNV
+GDPI +PTQDMLIGL VLTSGNRR VQDAEQQSL+LEKH HYGNV
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR----------------------------------------------------VQDAEQQSLILEKHPHYGNV
Query: HAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQLEE-------------------------------------------
HAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL E
Subjt: HAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQLEE-------------------------------------------
Query: -----ISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGI
ISVSP N M+PERIFIQTL+GRVLAD+IYMG RCI ++NQDIG GLINRFITFQTQ IS RTPFTCRSTSWICRLCYGRSPTH +LV+L E +GI
Subjt: -----ISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGI
Query: IAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRHGH
IA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKI+FNEDLVHPTRTRHGH
Subjt: IAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRHGH
|
|
| KAF6134982.1 hypothetical protein GIB67_021732 [Kingdonia uniflora] | 2.6e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| KAF6145474.1 hypothetical protein GIB67_020723 [Kingdonia uniflora] | 2.6e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| KAF6151618.1 hypothetical protein GIB67_012977, partial [Kingdonia uniflora] | 2.6e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| KAF6165008.1 hypothetical protein GIB67_010864 [Kingdonia uniflora] | 2.6e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6A1WQN9 DNA-directed RNA polymerase | 1.8e-121 | 48.92 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQP RDGHNKVYK F ETLLGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K S+ + L+++ +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR----------------------------------------------------VQDAEQQSLILEKHPHYGNV
+GDPI +PTQDMLIGL VLTSGNRR VQDAEQQSL+LEKH HYGNV
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR----------------------------------------------------VQDAEQQSLILEKHPHYGNV
Query: HAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQLEE-------------------------------------------
HAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL E
Subjt: HAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQLEE-------------------------------------------
Query: -----ISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGI
ISVSP N M+PERIFIQTL+GRVLAD+IYMG RCI ++NQDIG GLINRFITFQTQ IS RTPFTCRSTSWICRLCYGRSPTH +LV+L E +GI
Subjt: -----ISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGI
Query: IAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRHGH
IA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKI+FNEDLVHPTRTRHGH
Subjt: IAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRHGH
|
|
| A0A7J7KXF9 DNA-directed RNA polymerase subunit | 1.3e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| A0A7J7LSI3 Multifunctional fusion protein | 1.3e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| A0A7J7MA35 DNA-directed RNA polymerase subunit | 1.3e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
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| A0A7J7NDQ3 Multifunctional fusion protein | 1.3e-114 | 44.68 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ET+LGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + K +K+ + + L+ + +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
+GDPI VPTQDML+GL VLT GNRR VQD
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR---------------------------------------------------------------------VQD
Query: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
AEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: AEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL----------------------------
Query: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
IS+SP N M+ ERIFIQTLIGRVLAD+IYMGSRCI I+NQDIG GL+N+
Subjt: -------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIGIQNQDIGFGLINR
Query: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
FITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIKFNEDLVHPTRTRH
Subjt: FITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIKFNEDLVHPTRTRH
Query: GH
GH
Subjt: GH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B1A925 DNA-directed RNA polymerase subunit beta'' | 6.7e-89 | 57.14 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQSLILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
ISVSP NR +PERIFIQTLIGRVLAD+IYMG RCI
Subjt: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
Query: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
I+NQDIG GL+NRFITF+TQ IS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+R+PSNGKIK
Subjt: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
Query: FNEDLVHPTRTRHGH
FNEDLVHPTRTRHGH
Subjt: FNEDLVHPTRTRHGH
|
|
| Q09X27 DNA-directed RNA polymerase subunit beta'' | 3.9e-89 | 56.83 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQ LILEKH HYGNVHAVEKLRQSIE+WY T +H+MSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
+ ISVSP N M+PERIFIQTLIGRVLAD IY+GSRCI
Subjt: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
Query: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
++NQDIG GL+NRFITFQTQPIS RTPFTC+STSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIK
Subjt: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
Query: FNEDLVHPTRTRHGH
FNEDLVHPTRTRHGH
Subjt: FNEDLVHPTRTRHGH
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| Q3C1G9 DNA-directed RNA polymerase subunit beta'' | 6.7e-89 | 57.14 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQSLILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
ISVSP N M+PERIFIQTLIGRVLAD+IYMG RCI
Subjt: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
Query: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
+NQDIG GL+NRFITF+ QPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIK
Subjt: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
Query: FNEDLVHPTRTRHGH
FNEDLVHPTRTRHGH
Subjt: FNEDLVHPTRTRHGH
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| Q49L08 DNA-directed RNA polymerase subunit beta'' | 1.3e-89 | 57.14 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQSLILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
+SVSP N M+PERIFIQTLIGRVLAD+IYMG RCI
Subjt: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
Query: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
I+NQDIG GL+NRFITF+TQPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAPSNGKIK
Subjt: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
Query: FNEDLVHPTRTRHGH
FN+DLVHPTRTRHGH
Subjt: FNEDLVHPTRTRHGH
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 1.0e-92 | 59.37 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQSLILEKH HYGNVHAVEKLRQSIE+WY T +HIMSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
I VSPGNRMIPERIFIQTLIGRVLAD+IYMG RCIG
Subjt: --------------------------------------------------------------EEISVSPGNRMIPERIFIQTLIGRVLADNIYMGSRCIG
Query: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
++NQDIG GLINRFITFQTQPIS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+HIRAPSNGKIK
Subjt: IQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGKIK
Query: FNEDLVHPTRTRHGH
FNEDLVHPTRTRHGH
Subjt: FNEDLVHPTRTRHGH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G57660.1 nuclear RNA polymerase A1 | 4.0e-04 | 46.15 | Show/hide |
Query: RSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGG
+S L + EP+G++A QS+GE TQ+TL TFH G
Subjt: RSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGG
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 3.5e-85 | 54.89 | Show/hide |
Query: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
L + S VQDAEQQS ILEKH HYGNVHAVEKLRQSIE+WY T +H+MSFSGARGN SQVHQL
Subjt: LCVLTSGNRRVQDAEQQSLILEKHPHYGNVHAVEKLRQSIEMWYTT--------------------IHIMSFSGARGNESQVHQL---------------
Query: --------------------------------------------------------------EEISVSP--GNRMIPERIFIQTLIGRVLADNIYMGSRC
ISVSP NRM+ ERIFIQTLIGRVLAD+IY+GSRC
Subjt: --------------------------------------------------------------EEISVSP--GNRMIPERIFIQTLIGRVLADNIYMGSRC
Query: IGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGK
+ +NQD+G GL+NR ITF TQ IS RTPFTCRSTSWICRLCYGRSPTHG+LV+L E +GIIA QSIGE GTQLTLRTFHTGGVF GGTA+H+RAP NGK
Subjt: IGIQNQDIGFGLINRFITFQTQPISSRTPFTCRSTSWICRLCYGRSPTHGELVKLREPLGIIAVQSIGESGTQLTLRTFHTGGVFIGGTAKHIRAPSNGK
Query: IKFNEDLVHPTRTRHGH
IKFNEDLVHPTRTRHGH
Subjt: IKFNEDLVHPTRTRHGH
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 2.9e-31 | 41.23 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK F ETLLGK+VDYSGRSVIV
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK------------FGETLLGKQVDYSGRSVIV------------------------------------
Query: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
+ + + +K + + L+++ +GH GFN DFDGDQ+ VHVPLSLE AE
Subjt: --KLLRVKFEKKNSLYGKYLRKLCKKGH-----------------------------------LGFNVDFDGDQVVVHVPLSLEPHAE------------
Query: --LLGDPIFVPTQDMLIGLCVLTSGNRR
+GDPI VPTQDMLIGL VLTSG RR
Subjt: --LLGDPIFVPTQDMLIGLCVLTSGNRR
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