; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G011640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G011640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPoly(A)-specific ribonuclease
Genome locationCG_Chr01:19483255..19484091
RNA-Seq ExpressionClCG01G011640
SyntenyClCG01G011640
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]6.0e-13885.2Show/hide
Query:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MV+ DL   +K I+IREVWASNLE EF+LIR+LIDQFPCVSMDTEFPG+VF DP +P++ QN+PSDHYRLLKSNVDALNLIQIGITLSDS GNLPDLGT 
Subjt:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
         +RFIWEFNFMDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        FGD VYD+KY+MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTW AFQKMRDTYFVQN ++KHAGVLYGLE+
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]3.3e-13685.71Show/hide
Query:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIR+LID FPCVSMDTEFPGIVF  PT PFN+ N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]2.5e-13686.07Show/hide
Query:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIR+LID FPCVSMDTEFPGIVF  PT PFNS N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LP+RVDEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

XP_023541056.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]4.3e-13685.41Show/hide
Query:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ--PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL
        MV HDLN  + K+IKIREVWASNLE EFQLIR+LID FPCVSMDTEFPGIVF  PT PFN+ N+   SDHY+LLKSNVDALNLIQIGITLSDS GNLPDL
Subjt:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ--PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL

Query:  GTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVL
        GTDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVL
Subjt:  GTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVL

Query:  RVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        RV FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  RVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]6.2e-15194.6Show/hide
Query:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MVIHDLN  NK+IKIREVWASNLE EFQLIR+LIDQFPCVSMDTEFPGIVFADP RPFN Q+QPSDHYRLLKSNVDAL+LIQIGITLSDS GNLPDLGTD
Subjt:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
        DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQR LPDRVDEFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTW AFQKMRDTYFVQNE+QKHAGVLYGLE+F
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease2.0e-13182.37Show/hide
Query:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        M+IHDLNT +K+I+IREVWASNLE EF+LIR+LIDQFPCVSMDTEFPG++F     P  S N PS HY+ LKSNVD L+LIQIGITLSDS GNLPDLGT 
Subjt:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
        DTRFIWEFNF DFDVARDLHAP+SIELLRRQGIDF+RNR EGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILT + LP  +++FLGV+R+F
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        FGDNVYDMKYLMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQ E+ KHAGVLYGLE+F
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

A0A5A7T1W0 Poly(A)-specific ribonuclease3.2e-12980.14Show/hide
Query:  MVIHDLN----TVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPD
        M+IHDLN    +++K I+IREVWASNL+ EF+LI +LID+FPCVSMDTEFPG++F   T+P    N PS HY+ LKSNVD L+LIQIGITLSDS GNLPD
Subjt:  MVIHDLN----TVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPD

Query:  LGTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGV
        LGT DTRFIWEFNF DFDVARD HAPDSIELLRRQGIDF RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP  ++EFLGV
Subjt:  LGTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGV

Query:  LRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        +RVFFGDNVYDMKY+MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTW AFQKMRDT+FV+NE+ KHAGVLYGLE+F
Subjt:  LRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

A0A6J1CN71 Poly(A)-specific ribonuclease2.9e-13885.2Show/hide
Query:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MV+ DL   +K I+IREVWASNLE EF+LIR+LIDQFPCVSMDTEFPG+VF DP +P++ QN+PSDHYRLLKSNVDALNLIQIGITLSDS GNLPDLGT 
Subjt:  MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
         +RFIWEFNFMDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        FGD VYD+KY+MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTW AFQKMRDTYFVQN ++KHAGVLYGLE+
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

A0A6J1G223 Poly(A)-specific ribonuclease1.6e-13685.71Show/hide
Query:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIR+LID FPCVSMDTEFPGIVF  PT PFN+ N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

A0A6J1HU54 Poly(A)-specific ribonuclease1.2e-13686.07Show/hide
Query:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIR+LID FPCVSMDTEFPGIVF  PT PFNS N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVIHDLNTVN-KTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LP+RVDEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTW AFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 112.3e-10869.49Show/hide
Query:  VNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE
        ++  I IR+VWA NLE EF LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+ GNLPDL G  + R+IWE
Subjt:  VNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE

Query:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD
        FNF DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD
Subjt:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD

Query:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        +K++MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTWQAFQ+MRD YFV++  +KHAGVLYGLE+F
Subjt:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.5e-7554.14Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM
        +I IREVW  NL  EF LIR ++D+F  ++MDTEFPG+V   P   F   N    +YR LK NVD L LIQ+G+T SD +GNLP  GTD    IW+FNF 
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM

Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +F++  D++A +SIELLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        M FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ YF     +K+ GVLYGL +
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.0e-10768.84Show/hide
Query:  DLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-
        DL     T+  REVWA NLE EF+LI  +ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R 
Subjt:  DLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-

Query:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD
        FIWEFNF DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD

Query:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
         VYD+K++M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFVQ+  +KHAGVLYGLE+F
Subjt:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.6e-7753.93Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIR+++D FP V+MDTEFPGIV     RP  +    +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL +
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.6e-7954.51Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM
        +I+IREVW  NLE E  LIR ++D FP V+MDTEFPGIV   P   F +  +   HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF 
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM

Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D++A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ +F+   ++K++GVLYGL +
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-7853.93Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIR+++D FP V+MDTEFPGIV     RP  +    +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL +
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-7853.93Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIR+++D FP V+MDTEFPGIV     RP  +    +D HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSD-HYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL +
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-8054.51Show/hide
Query:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM
        +I+IREVW  NLE E  LIR ++D FP V+MDTEFPGIV   P   F +  +   HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF 
Subjt:  TIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM

Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D++A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ +F+   ++K++GVLYGL +
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEI

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-10868.84Show/hide
Query:  DLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-
        DL     T+  REVWA NLE EF+LI  +ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R 
Subjt:  DLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-

Query:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD
        FIWEFNF DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD

Query:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
         VYD+K++M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFVQ+  +KHAGVLYGLE+F
Subjt:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-10969.49Show/hide
Query:  VNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE
        ++  I IR+VWA NLE EF LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+ GNLPDL G  + R+IWE
Subjt:  VNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE

Query:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD
        FNF DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD
Subjt:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD

Query:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF
        +K++MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTWQAFQ+MRD YFV++  +KHAGVLYGLE+F
Subjt:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATCCACGATCTGAACACCGTCAATAAAACCATCAAAATCCGTGAAGTTTGGGCTTCCAATCTCGAATTCGAATTCCAGTTGATTCGCAATCTCATCGAT
CAATTCCCTTGCGTTTCAATGGACACGGAATTCCCCGGAATCGTTTTCGCCGATCCAACCAGACCCTTCAACTCTCAAAATCAGCCTTCCGATCACTACAGACTC
CTCAAATCCAACGTCGACGCTCTCAACCTCATCCAGATCGGAATCACTCTCTCCGATTCCCACGGAAACTTGCCGGATCTCGGCACCGACGACACCCGATTCATC
TGGGAGTTCAATTTCATGGATTTCGACGTGGCGCGTGACCTCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCAACCGGAATCGGGTA
GAAGGGATCGACTCGTCCCGCTTCGCCGAGTTGATGATGTCATCAGGACTCGTCTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGG
TATTTGGTTAAGATTTTGACTCAGCGAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTAC
TTGATGCGGTTTTGCGAGAGTCTCTACGGCGGTTTGGACCGGATTGCTAAAATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCCGATAGC
TTGCTGACGTGGCAAGCGTTTCAGAAGATGAGAGATACCTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTTCTCTATGGATTAGAGATCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATCCACGATCTGAACACCGTCAATAAAACCATCAAAATCCGTGAAGTTTGGGCTTCCAATCTCGAATTCGAATTCCAGTTGATTCGCAATCTCATCGAT
CAATTCCCTTGCGTTTCAATGGACACGGAATTCCCCGGAATCGTTTTCGCCGATCCAACCAGACCCTTCAACTCTCAAAATCAGCCTTCCGATCACTACAGACTC
CTCAAATCCAACGTCGACGCTCTCAACCTCATCCAGATCGGAATCACTCTCTCCGATTCCCACGGAAACTTGCCGGATCTCGGCACCGACGACACCCGATTCATC
TGGGAGTTCAATTTCATGGATTTCGACGTGGCGCGTGACCTCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCAACCGGAATCGGGTA
GAAGGGATCGACTCGTCCCGCTTCGCCGAGTTGATGATGTCATCAGGACTCGTCTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGG
TATTTGGTTAAGATTTTGACTCAGCGAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTAC
TTGATGCGGTTTTGCGAGAGTCTCTACGGCGGTTTGGACCGGATTGCTAAAATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCCGATAGC
TTGCTGACGTGGCAAGCGTTTCAGAAGATGAGAGATACCTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTTCTCTATGGATTAGAGATCTTCTAA
Protein sequenceShow/hide protein sequence
MVIHDLNTVNKTIKIREVWASNLEFEFQLIRNLIDQFPCVSMDTEFPGIVFADPTRPFNSQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFI
WEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWQAFQKMRDTYFVQNEVQKHAGVLYGLEIF