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ClCG01G011670 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G011670
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationCG_Chr01:19551997..19552866
RNA-Seq ExpressionClCG01G011670
SyntenyClCG01G011670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]1.3e-2033.04Show/hide
Query:  LDHLSFP---SRWNVEAPGN-WEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRK
        L H SF     RW  E  GN WEG+K          K K  N+    E+ +   DI         +++ G L   L  +  L K E  EL+ RE I WR+
Subjt:  LDHLSFP---SRWNVEAPGN-WEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRK

Query:  NVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------------------------------------GEQA-ELDSPFTVDEIKKVVFE
          +V+W K+GDCNS FFH++  GRR++  +  LE + G+                                       GE A  L+SPFT +EI K +F+
Subjt:  NVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------------------------------------GEQA-ELDSPFTVDEIKKVVFE

Query:  CNTNKAHAHDSFSVAFFQDNWEEIKED
         + +KA   D F++A FQD WE IKED
Subjt:  CNTNKAHAHDSFSVAFFQDNWEEIKED

RVW16109.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.4e-2134.2Show/hide
Query:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK
        +F   W+      WEG+K          K K  N+    E+KE    I         I++ G L+  L  + +  K E  EL+ RE I WR+  KV+W K
Subjt:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK

Query:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG------------VGEQA--ELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +GDCNS F+H++  GRR++  +  LE + G            + E++   L+SPFT +EI K +F+ + NKA   D F++A FQ+ W+ IKED
Subjt:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG------------VGEQA--ELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

RVW17671.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.7e-2135.05Show/hide
Query:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK
        +F   W+      WEG+K          K K  N+    E+KE    I         I++ G L+  L  +    K E  EL+ RE I WR+  KV+W K
Subjt:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK

Query:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG-VGEQAE--------------LDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +GDCNS F+H++  GRR++  +  LE + G V + AE              LDSPFT +EI K +F+ + +KA   D F++A FQ+ W+ IKED
Subjt:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG-VGEQAE--------------LDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

RVW39477.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.1e-2337.56Show/hide
Query:  LDHLSFP---SRWNVEAPGN-WEGYKLEKWKALNRCQNPEIKET-FGDIRIKK----------------GGPLDEILKQEHLLLKVEFVELVRRETISWR
        L H SF     RW  E  GN WEG+K  +     + +  E  +T FG++  KK                GG   E+L Q   L K E  EL+ RE I WR
Subjt:  LDHLSFP---SRWNVEAPGN-WEGYKLEKWKALNRCQNPEIKET-FGDIRIKK----------------GGPLDEILKQEHLLLKVEFVELVRRETISWR

Query:  KNVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------GEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +  +V+W K+GDCNS FFH++  GRR++  +  LE + G+          E   L+SPFT +EI K +F+ + +KA   D F++A FQD W+ IKED
Subjt:  KNVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------GEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]4.2e-2435.1Show/hide
Query:  GNWEGYK-LEKWKALNRCQNPEIKETFGDIRIKK---------------GGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAKDGDCNSAFFHR
        G W+GY+ ++K +ALN       ++ FGDI+IKK                GPLD  LK+E +  K +  E++R+E +SW +  K++W K+GDCN++FFHR
Subjt:  GNWEGYK-LEKWKALNRCQNPEIKETFGDIRIKK---------------GGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAKDGDCNSAFFHR

Query:  MVTGRRSKNLLGSLEKDGG----------------------------------------VGEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQD
            RR+KN LG L  D G                                          E  +L   FT+DE+KKVVF C+ NK    D FSV FF  
Subjt:  MVTGRRSKNLLGSLEKDGG----------------------------------------VGEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQD

Query:  NWEEIKED
        NW  IK D
Subjt:  NWEEIKED

TrEMBL top hitse value%identityAlignment
A0A438BYN0 Transposon TX1 uncharacterized 149 kDa protein3.6e-2134.2Show/hide
Query:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK
        +F   W+      WEG+K          K K  N+    E+KE    I         I++ G L+  L  + +  K E  EL+ RE I WR+  KV+W K
Subjt:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK

Query:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG------------VGEQA--ELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +GDCNS F+H++  GRR++  +  LE + G            + E++   L+SPFT +EI K +F+ + NKA   D F++A FQ+ W+ IKED
Subjt:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG------------VGEQA--ELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

A0A438C362 Transposon TX1 uncharacterized 149 kDa protein4.7e-2135.05Show/hide
Query:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK
        +F   W+      WEG+K          K K  N+    E+KE    I         I++ G L+  L  +    K E  EL+ RE I WR+  KV+W K
Subjt:  SFPSRWNVEAPGNWEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAK

Query:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG-VGEQAE--------------LDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +GDCNS F+H++  GRR++  +  LE + G V + AE              LDSPFT +EI K +F+ + +KA   D F++A FQ+ W+ IKED
Subjt:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGG-VGEQAE--------------LDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

A0A438DVH3 Transposon TX1 uncharacterized 149 kDa protein1.0e-2337.56Show/hide
Query:  LDHLSFP---SRWNVEAPGN-WEGYKLEKWKALNRCQNPEIKET-FGDIRIKK----------------GGPLDEILKQEHLLLKVEFVELVRRETISWR
        L H SF     RW  E  GN WEG+K  +     + +  E  +T FG++  KK                GG   E+L Q   L K E  EL+ RE I WR
Subjt:  LDHLSFP---SRWNVEAPGN-WEGYKLEKWKALNRCQNPEIKET-FGDIRIKK----------------GGPLDEILKQEHLLLKVEFVELVRRETISWR

Query:  KNVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------GEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED
        +  +V+W K+GDCNS FFH++  GRR++  +  LE + G+          E   L+SPFT +EI K +F+ + +KA   D F++A FQD W+ IKED
Subjt:  KNVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------GEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKED

A0A5D3BW32 Uncharacterized protein2.0e-2435.1Show/hide
Query:  GNWEGYK-LEKWKALNRCQNPEIKETFGDIRIKK---------------GGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAKDGDCNSAFFHR
        G W+GY+ ++K +ALN       ++ FGDI+IKK                GPLD  LK+E +  K +  E++R+E +SW +  K++W K+GDCN++FFHR
Subjt:  GNWEGYK-LEKWKALNRCQNPEIKETFGDIRIKK---------------GGPLDEILKQEHLLLKVEFVELVRRETISWRKNVKVRWAKDGDCNSAFFHR

Query:  MVTGRRSKNLLGSLEKDGG----------------------------------------VGEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQD
            RR+KN LG L  D G                                          E  +L   FT+DE+KKVVF C+ NK    D FSV FF  
Subjt:  MVTGRRSKNLLGSLEKDGG----------------------------------------VGEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQD

Query:  NWEEIKED
        NW  IK D
Subjt:  NWEEIKED

A5BCI7 Reverse transcriptase domain-containing protein6.1e-2133.04Show/hide
Query:  LDHLSFP---SRWNVEAPGN-WEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRK
        L H SF     RW  E  GN WEG+K          K K  N+    E+ +   DI         +++ G L   L  +  L K E  EL+ RE I WR+
Subjt:  LDHLSFP---SRWNVEAPGN-WEGYKL--------EKWKALNRCQNPEIKETFGDI--------RIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRK

Query:  NVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------------------------------------GEQA-ELDSPFTVDEIKKVVFE
          +V+W K+GDCNS FFH++  GRR++  +  LE + G+                                       GE A  L+SPFT +EI K +F+
Subjt:  NVKVRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV---------------------------------------GEQA-ELDSPFTVDEIKKVVFE

Query:  CNTNKAHAHDSFSVAFFQDNWEEIKED
         + +KA   D F++A FQD WE IKED
Subjt:  CNTNKAHAHDSFSVAFFQDNWEEIKED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein6.3e-1024.14Show/hide
Query:  LSFPSRWNVEAPGNWEGYKL-EKWKALNRCQNPEIKETFGDIRIKKGGPLDEILKQEHLLLKVEFVELVRRETIS--------------WRKNVKVRWAK
        +S    W  + P     + L E  KA  +C     ++ FG+I+ K    LD +   +  LL      L R E ++              +R+  +++W +
Subjt:  LSFPSRWNVEAPGNWEGYKL-EKWKALNRCQNPEIKETFGDIRIKKGGPLDEILKQEHLLLKVEFVELVRRETIS--------------WRKNVKVRWAK

Query:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV--------------------GEQAELDSPFTVDEIKKV-VFECN------------------------T
        DGD N+ FFH+++   ++KNL+  L  D  V                    G  +++ +P +V  IK +  F CN                         
Subjt:  DGDCNSAFFHRMVTGRRSKNLLGSLEKDGGV--------------------GEQAELDSPFTVDEIKKV-VFECN------------------------T

Query:  NKAHAHDSFSVAFFQDNWEEIKEDFAWAEIKE
        NKA   DSF+  FF ++W  +K D   A +KE
Subjt:  NKAHAHDSFSVAFFQDNWEEIKEDFAWAEIKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCTACGTGAGTGTGAAAACCAGTTTTGGACGTTCGGGGTATTGCCCCTTAATCGAGGAGTTGGACCATCTGTCTTTCCCCTCAAGGTGGAATGTGGAG
GCTCCTGGTAACTGGGAGGGGTACAAGTTAGAAAAGTGGAAGGCTCTTAACCGATGCCAAAATCCAGAAATCAAAGAAACCTTTGGAGATATAAGGATAAAAAAA
GGAGGACCGTTGGATGAGATACTCAAGCAAGAGCATCTCTTGTTAAAAGTGGAGTTTGTGGAGCTGGTAAGGAGAGAGACCATAAGTTGGAGAAAAAATGTGAAA
GTAAGGTGGGCCAAGGATGGCGACTGTAATTCTGCATTTTTCCATAGAATGGTGACGGGTAGAAGAAGCAAGAACTTACTTGGCTCTTTAGAGAAAGATGGGGGA
GTTGGTGAACAGGCTGAGTTGGATTCCCCTTTTACCGTAGATGAAATCAAGAAAGTTGTTTTTGAGTGCAATACAAACAAAGCCCATGCGCATGATAGTTTCTCT
GTTGCTTTCTTTCAAGATAATTGGGAGGAAATTAAGGAGGATTTTGCATGGGCGGAAATTAAGGAGGATCTCTGCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCTACGTGAGTGTGAAAACCAGTTTTGGACGTTCGGGGTATTGCCCCTTAATCGAGGAGTTGGACCATCTGTCTTTCCCCTCAAGGTGGAATGTGGAG
GCTCCTGGTAACTGGGAGGGGTACAAGTTAGAAAAGTGGAAGGCTCTTAACCGATGCCAAAATCCAGAAATCAAAGAAACCTTTGGAGATATAAGGATAAAAAAA
GGAGGACCGTTGGATGAGATACTCAAGCAAGAGCATCTCTTGTTAAAAGTGGAGTTTGTGGAGCTGGTAAGGAGAGAGACCATAAGTTGGAGAAAAAATGTGAAA
GTAAGGTGGGCCAAGGATGGCGACTGTAATTCTGCATTTTTCCATAGAATGGTGACGGGTAGAAGAAGCAAGAACTTACTTGGCTCTTTAGAGAAAGATGGGGGA
GTTGGTGAACAGGCTGAGTTGGATTCCCCTTTTACCGTAGATGAAATCAAGAAAGTTGTTTTTGAGTGCAATACAAACAAAGCCCATGCGCATGATAGTTTCTCT
GTTGCTTTCTTTCAAGATAATTGGGAGGAAATTAAGGAGGATTTTGCATGGGCGGAAATTAAGGAGGATCTCTGCACATGA
Protein sequenceShow/hide protein sequence
MEVYVSVKTSFGRSGYCPLIEELDHLSFPSRWNVEAPGNWEGYKLEKWKALNRCQNPEIKETFGDIRIKKGGPLDEILKQEHLLLKVEFVELVRRETISWRKNVK
VRWAKDGDCNSAFFHRMVTGRRSKNLLGSLEKDGGVGEQAELDSPFTVDEIKKVVFECNTNKAHAHDSFSVAFFQDNWEEIKEDFAWAEIKEDLCT