| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-61 | 64.29 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK +L YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-60 | 63.81 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK IL YLRR RDYML+YGAK+LILT +T+S+FQT+ DS+KST VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-61 | 64.76 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK IL YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-61 | 64.29 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK +L YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-61 | 64.76 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWTTVK IL YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLN VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 2.1e-60 | 63.81 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK IL YLRR RDYML+YGAK+LILT +T+S+FQT+ DS+KST VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| A0A5A7TKM4 Gag/pol protein | 6.4e-62 | 64.76 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK IL YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| A0A5A7TZD0 Gag/pol protein | 8.4e-62 | 64.29 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK +L YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| A0A5A7UYE8 Gag/pol protein | 8.4e-62 | 64.29 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWT VK +L YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLNG VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| A0A5A7V1F5 Gag/pol protein | 1.9e-61 | 64.76 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
MLC Y VGIVSR+QSNPG DHWTTVK IL YLRR RDYML+YGAK+LILT +TDS+FQT+ DS+KST G VFTLN VVWRSIKQ
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQA--------
Query: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
LEVVPNM+LPITLYCDNSGAVANSKEPRSH GK+IERKYHLIREIVQRGD+IV +IA + NI+D FTK L AK+FEG
Subjt: ---------------------GLEVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEG
Query: HLVSLGLQVM
HL SLGL+ M
Subjt: HLVSLGLQVM
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.2e-10 | 26.67 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLI----LTRFTDSNFQTNIDSKKSTLGLVFTL-NGEEVVWRSIKQAGL-
MLC T V I+SR+ S + W +K +L YL+ D L++ KNL + + DS++ + +KST G +F + + + W + +Q +
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLI----LTRFTDSNFQTNIDSKKSTLGLVFTL-NGEEVVWRSIKQAGL-
Query: --------------------------EVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKM
+ + PI +Y DN G ++ + P H K+I+ KYH RE VQ + ++ I + ++D FTK L A
Subjt: --------------------------EVVPNMHLPITLYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKM
Query: FEGHLVSLGL
F LGL
Subjt: FEGHLVSLGL
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| P0CV72 Secreted RxLR effector protein 161 | 2.3e-08 | 38.27 | Show/hide |
Query: VGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMY-GAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQ
VG++S+F S+P HW +K +L YL+ + Y L + A L ++D+++ +++S++ST G +F LNG V WRS KQ
Subjt: VGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMY-GAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-19 | 32.14 | Show/hide |
Query: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQ--AGLEVVP
M+C + VG+VSRF NPG +HW VK IL YLR L +G + IL +TD++ +ID++KS+ G +FT +G + W+S Q L
Subjt: MLCCVHVQTYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDYMLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQ--AGLEVVP
Query: NMHLPIT------------------------LYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFE
++ T +YCD+ A+ SK H K+I+ +YH IRE+V L V +I+ +N +D TK + FE
Subjt: NMHLPIT------------------------LYCDNSGAVANSKEPRSH-NGKNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-11 | 26.26 | Show/hide |
Query: TYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDY-MLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQAGL-------------
+Y V +S++ P DHW +K +L YL D+ + + L L ++D+++ + D ST G + L + W S KQ G+
Subjt: TYVVGIVSRFQSNPGYDHWTTVKNILTYLRRMRDY-MLMYGAKNLILTRFTDSNFQTNIDSKKSTLGLVFTLNGEEVVWRSIKQAGL-------------
Query: --------------EVVPNMHLPITLYCDNSGAVANSKEPRSHNG-KNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEGHLVSLGL
E+ + P +YCDN GA P H+ K+I YH IR VQ G L V ++ ++D+ TK L F+ +G+
Subjt: --------------EVVPNMHLPITLYCDNSGAVANSKEPRSHNG-KNIERKYHLIREIVQRGDLIVKQIALKQNISDSFTKALMAKMFEGHLVSLGL
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