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ClCG01G011760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G011760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionphotosystem I subunit O
Genome locationCG_Chr01:20061759..20064931
RNA-Seq ExpressionClCG01G011760
SyntenyClCG01G011760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139499.1 photosystem I subunit O [Cucumis sativus]9.4e-4396.59Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]7.2e-4396.59Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]5.5e-4395.45Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]2.7e-4295.45Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYF K
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]2.5e-4397.73Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein4.6e-4396.59Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O3.5e-4396.59Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O2.7e-4395.45Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O1.3e-4295.45Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        DWLRRDLNVIGF LIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYF K
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A7N0VE46 Uncharacterized protein1.0e-4274.17Show/hide
Query:  PELPVSSPGSSGHRSPPGILSLWHVHPAEDSPDWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLF
        P  P++ PG+SG R                  DWLRRDL+VIGF LIGW+APSSIP INGKSLTGLFFESIGAELAHFP+PPALTSQFWLWLITWHLGLF
Subjt:  PELPVSSPGSSGHRSPPGILSLWHVHPAEDSPDWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLF

Query:  IMLTFGQIGFKGRTEDYFSK
        I LTFGQIGFKGRTEDYFSK
Subjt:  IMLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O3.7e-4287.21Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF
        +WLRRDLNV+GF LIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O2.6e-4387.21Show/hide
Query:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF
        +WLRRDLNV+GF LIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  DWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCC
ACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCACCG
CCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCG
CCGCCAGGAATCCTCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGCACTGATCGGGTGGATT
GCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACT
TCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAG
TGA
mRNA sequenceShow/hide mRNA sequence
AACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCC
ACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCACCG
CCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCG
CCGCCAGGAATCCTCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGCACTGATCGGGTGGATT
GCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACT
TCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAG
TGAAAATGTAATAATTCTTAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATC
GCAACCTCCAAATCTTGGTATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGTTTGAACTATTAAGTTCAAAGGAAAAGTGA
TAAGTAACACTCGAGGACATGTGATATGAACGGAGGAACCTTAAACATGCAATATGAACATAAACAATGAGCCATACATGCTGTCCAAGTTTACACTAGGCAAAG
AAGAAGAATTATATGAAGTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATG
GTTACAAATGCATGAAATATGGTTAAAAAATATTAATCTCGGATTTATTGTATTTATTAAAT
Protein sequenceShow/hide protein sequence
NGPLYPKNSEVSKLDSSEIDSLSKAIKSTIPKISSTQISQQNPNLFPSLLQNNRTTQALIRTNPLKKWPPPSLPPPPSSVSEPPPFLLLPPELPVSSPGSSGHRS
PPGILSLWHVHPAEDSPDWLRRDLNVIGFALIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK