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ClCG01G011930 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G011930
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransposase
Genome locationCG_Chr01:21356174..21358430
RNA-Seq ExpressionClCG01G011930
SyntenyClCG01G011930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136076.1 uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]1.5e-1730Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

XP_022136077.1 uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]1.5e-1730Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

XP_022136079.1 uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]1.5e-1730Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

XP_022136080.1 uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]1.5e-1730Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

XP_038895921.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida]3.4e-1425.48Show/hide
Query:  TLKQDVELEKIHEGQDVLTQ--ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLD----------------------
        TL ++    K +E  D+ T+  A    E A+  +GQD+LT+AL TPEH  ++RGVG FVSP+ ++NV + K L+++ +                      
Subjt:  TLKQDVELEKIHEGQDVLTQ--ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLD----------------------

Query:  --------PIVDKKELLE-------------------VAQDSFTPSNGKACQLAMSSLSNIVAIGTMFESKG-TEKVNGMSLGLDNIKVFYEISFGEDIL
                 +V+KK   +                   V +D      G  C LA+ S+ NIVA+GTMFES      +N + LG DN++   +I  GED+ 
Subjt:  --------PIVDKKELLE-------------------VAQDSFTPSNGKACQLAMSSLSNIVAIGTMFESKG-TEKVNGMSLGLDNIKVFYEISFGEDIL

Query:  IPILMKELPK------------------------------------------------------------HDAPRVPLSDRVFRRRKIVFLMLEDVMQLC
        +PI  K+  K                                                             D  ++ LS+++  + K ++L  +D++Q C
Subjt:  IPILMKELPK------------------------------------------------------------HDAPRVPLSDRVFRRRKIVFLMLEDVMQLC

Query:  EMVKISNSCLLVYI
         M +I  SC+L YI
Subjt:  EMVKISNSCLLVYI

TrEMBL top hitse value%identityAlignment
A0A5A7T267 Transposase6.3e-1429.57Show/hide
Query:  EGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIV--------------DKKEL-----------LEVAQDSFTPSN----GKACQL
        + +D+LT AL + EH   VRGVG FVS S YFN V+ K  E ++ P V              DKK             +++  D  TPSN    G  CQL
Subjt:  EGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIV--------------DKKEL-----------LEVAQDSFTPSN----GKACQL

Query:  AMSSLSNIVAIGTMFESKGTEKVNGMSLGLDNIKVFYEISFGEDILIP----------------------------ILMKELPKHDAPRVPLSDRVFRRR
         + S++NIV +  + +          ++G  N+KV  ++  GE++ IP                             ++K +   D  R+P+++ +F   
Subjt:  AMSSLSNIVAIGTMFESKGTEKVNGMSLGLDNIKVFYEISFGEDILIP----------------------------ILMKELPKHDAPRVPLSDRVFRRR

Query:  KIVFLMLEDVMQLCEMVKISNSCLLVYIGV
        K V+L  ED++  C+MV+I   C+LVYI V
Subjt:  KIVFLMLEDVMQLCEMVKISNSCLLVYIGV

A0A6J1C2H7 uncharacterized protein LOC111007859 isoform X17.2e-1830Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

A0A6J1C2V2 uncharacterized protein LOC111007859 isoform X47.2e-1830Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

A0A6J1C398 uncharacterized protein LOC111007859 isoform X37.2e-1830Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

A0A6J1C4J7 uncharacterized protein LOC111007859 isoform X27.2e-1830Show/hide
Query:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA
        A    E A+  +G+D+LT+AL T EH+ +VRGVG FVSPS YFNVV+ K+    L P                 KE++ V ++ +        GK C LA
Subjt:  ALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFNVVRLKTLEIVLDPIVDK-------------KELLEVAQDSFTPS----NGKACQLA

Query:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----
        + S+ NIVA+GT+F++      V+G+ LG+DN++V  +I   E   IPI ++                                       +L KH    
Subjt:  MSSLSNIVAIGTMFESK-GTEKVNGMSLGLDNIKVFYEISFGEDILIPILMK---------------------------------------ELPKH----

Query:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI
                         D   + LS  +F + K ++L   D+MQ C M++I  SC+L YI
Subjt:  -----------------DAPRVPLSDRVFRRRKIVFLMLEDVMQLCEMVKISNSCLLVYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTTGACGACGACTATCAAACAGCAGCTGACGACGGCAATCGAACAGTGACTGATCTACAAAACAAGTGGCGACTTACCAGGCTTCAAACGGGGTTAAAATTCAT
ATGGTATTCGTGCTTAAATTGTGGAAATACACTCAAACAAGATGTTGAGTTAGAAAAAATTCATGAAGGCCAAGATGTTCTGACTCAAGCATTGGAGACACCTGAACATG
CTAGCCAAACTGAAGGCCAAGATGTTCTGACTCAAGCATTGGAGACACCTGAACATGCTAGCCAAGTGCGTGGAGTTGGGAATTTTGTGTCACCCTCAACTTATTTCAAT
GTTGTGAGACTGAAGACATTAGAAATTGTACTGGATCCGATAGTTGATAAGAAAGAACTACTTGAAGTTGCCCAAGATTCATTTACACCTTCAAATGGTAAAGCATGTCA
ATTAGCAATGAGTTCGCTTTCAAACATTGTTGCAATTGGCACCATGTTTGAGAGTAAAGGAACTGAAAAGGTTAATGGAATGTCTTTAGGACTAGATAATATAAAGGTGT
TTTATGAAATCTCATTTGGAGAAGACATTTTGATTCCAATACTGATGAAGGAACTTCCCAAGCATGATGCACCAAGGGTGCCCCTTAGTGATCGAGTCTTCAGAAGGAGG
AAAATAGTTTTTCTTATGCTAGAGGATGTCATGCAACTATGCGAAATGGTAAAAATATCAAATTCATGCTTACTAGTCTACATTGGGGTTAGAAGTAGGGAACCTATTCA
AAGTAGTAGACTCAAACGATTTTGCACCTTGTTTTGGAACACCGACCAATCGTGCAAAACTCTTTCAATGGTCTTCTCGGAACAACCACGACAAAGGGTGTTCATTCCAT
ACAATCCTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTTGACGACGACTATCAAACAGCAGCTGACGACGGCAATCGAACAGTGACTGATCTACAAAACAAGTGGCGACTTACCAGGCTTCAAACGGGGTTAAAATTCAT
ATGGTATTCGTGCTTAAATTGTGGAAATACACTCAAACAAGATGTTGAGTTAGAAAAAATTCATGAAGGCCAAGATGTTCTGACTCAAGCATTGGAGACACCTGAACATG
CTAGCCAAACTGAAGGCCAAGATGTTCTGACTCAAGCATTGGAGACACCTGAACATGCTAGCCAAGTGCGTGGAGTTGGGAATTTTGTGTCACCCTCAACTTATTTCAAT
GTTGTGAGACTGAAGACATTAGAAATTGTACTGGATCCGATAGTTGATAAGAAAGAACTACTTGAAGTTGCCCAAGATTCATTTACACCTTCAAATGGTAAAGCATGTCA
ATTAGCAATGAGTTCGCTTTCAAACATTGTTGCAATTGGCACCATGTTTGAGAGTAAAGGAACTGAAAAGGTTAATGGAATGTCTTTAGGACTAGATAATATAAAGGTGT
TTTATGAAATCTCATTTGGAGAAGACATTTTGATTCCAATACTGATGAAGGAACTTCCCAAGCATGATGCACCAAGGGTGCCCCTTAGTGATCGAGTCTTCAGAAGGAGG
AAAATAGTTTTTCTTATGCTAGAGGATGTCATGCAACTATGCGAAATGGTAAAAATATCAAATTCATGCTTACTAGTCTACATTGGGGTTAGAAGTAGGGAACCTATTCA
AAGTAGTAGACTCAAACGATTTTGCACCTTGTTTTGGAACACCGACCAATCGTGCAAAACTCTTTCAATGGTCTTCTCGGAACAACCACGACAAAGGGTGTTCATTCCAT
ACAATCCTAGGTAA
Protein sequenceShow/hide protein sequence
MTVDDDYQTAADDGNRTVTDLQNKWRLTRLQTGLKFIWYSCLNCGNTLKQDVELEKIHEGQDVLTQALETPEHASQTEGQDVLTQALETPEHASQVRGVGNFVSPSTYFN
VVRLKTLEIVLDPIVDKKELLEVAQDSFTPSNGKACQLAMSSLSNIVAIGTMFESKGTEKVNGMSLGLDNIKVFYEISFGEDILIPILMKELPKHDAPRVPLSDRVFRRR
KIVFLMLEDVMQLCEMVKISNSCLLVYIGVRSREPIQSSRLKRFCTLFWNTDQSCKTLSMVFSEQPRQRVFIPYNPR