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ClCG01G012040 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G012040
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransposase
Genome locationCG_Chr01:21687561..21688216
RNA-Seq ExpressionClCG01G012040
SyntenyClCG01G012040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038004.1 transposase-like protein [Cucumis melo var. makuwa]1.4e-2971.28Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK
        +PP PL  E I  +L    F C K+HCLDVMHIEKNV +N+IGTLL+IP KSKDG++ RLDLVEMNIRPELAPVS GSR YIPA CYTLSR+EK
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK

KAA0051767.1 transposase [Cucumis melo var. makuwa]4.1e-2955.12Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PPEPL  EAI  KL +MIFS  KK                               HCLD+MHIEKNVC+N++GTLL++P+KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        ELAP+ +G+R YIPA CYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

KAA0062841.1 transposase [Cucumis melo var. makuwa]8.3e-3056.69Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLLNIP KSKD +N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        +LAP+ +G+R YIPATCYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

TYK11977.1 transposase [Cucumis melo var. makuwa]1.4e-2956.69Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PP PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLL+IP KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        ELAP+ +G+R YIPA CYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

XP_031741700.1 uncharacterized protein LOC116403896 [Cucumis sativus]1.2e-2853.54Show/hide
Query:  PPEPLLEEAICMKLNKMIFSCEKK--------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        PP+PL +EA+ +K+  MIFSC KK                                HCLD+MHIEKNVC+N++GTLL+IP KSKDG+NTRLDLVEM IRP
Subjt:  PPEPLLEEAICMKLNKMIFSCEKK--------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        ELAP  +G+R YIPA CYTLS++EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

TrEMBL top hitse value%identityAlignment
A0A5A7T3F8 Transposase-like protein6.9e-3071.28Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK
        +PP PL  E I  +L    F C K+HCLDVMHIEKNV +N+IGTLL+IP KSKDG++ RLDLVEMNIRPELAPVS GSR YIPA CYTLSR+EK
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK

A0A5A7TBU6 Uncharacterized protein1.7e-2854.76Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC  K                               HCLDVMHIEKNVC+N++GTLL+IP KS+DG+N RLDLVE+NIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKF
        ELAP+  G+R YIPATCYTLSR+EK+
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKF

A0A5A7UBI8 Transposase2.0e-2955.12Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PPEPL  EAI  KL +MIFS  KK                               HCLD+MHIEKNVC+N++GTLL++P+KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        ELAP+ +G+R YIPA CYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

A0A5A7VAX7 Transposase4.0e-3056.69Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLLNIP KSKD +N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        +LAP+ +G+R YIPATCYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

A0A5D3CJ44 Transposase6.9e-3056.69Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP
        +PP PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLL+IP KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFR
        ELAP+ +G+R YIPA CYTLSR+EK+R
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACTTGTTAAATGATGTTTCCAATAGGTTAGACAGTCCTCCAGAACCTTTGTTAGAAGAGGCCATTTGCATGAAACTCAACAAAATGATATTTTCATGTGAGAA
GAAACATTGTCTTGATGTCATGCATATTGAAAAGAATGTGTGCATAAATGTAATAGGAACATTGCTTAATATACCTGAAAAAAGTAAAGATGGGATCAATACTAGACTTG
ATCTAGTTGAAATGAACATTCGACCTGAACTAGCACCCGTGTCTAGTGGGAGTAGAATGTACATACCCGCAACATGTTATACGTTGTCAAGAAAAGAGAAGTTCCGGAAC
GGTATTCATTGGAGTTCTCCAGTAGCTTTACGATGTTTGCTTCGAGAATTAGAGTATATTGGATCAACAATCCAACTTTCTGTACTCGTTGAGGTGTTCGGGATTCAATG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGCGACTTGTTAAATGATGTTTCCAATAGGTTAGACAGTCCTCCAGAACCTTTGTTAGAAGAGGCCATTTGCATGAAACTCAACAAAATGATATTTTCATGTGAGAA
GAAACATTGTCTTGATGTCATGCATATTGAAAAGAATGTGTGCATAAATGTAATAGGAACATTGCTTAATATACCTGAAAAAAGTAAAGATGGGATCAATACTAGACTTG
ATCTAGTTGAAATGAACATTCGACCTGAACTAGCACCCGTGTCTAGTGGGAGTAGAATGTACATACCCGCAACATGTTATACGTTGTCAAGAAAAGAGAAGTTCCGGAAC
GGTATTCATTGGAGTTCTCCAGTAGCTTTACGATGTTTGCTTCGAGAATTAGAGTATATTGGATCAACAATCCAACTTTCTGTACTCGTTGAGGTGTTCGGGATTCAATG
A
Protein sequenceShow/hide protein sequence
MGDLLNDVSNRLDSPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINTRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEKFRN
GIHWSSPVALRCLLRELEYIGSTIQLSVLVEVFGIQ