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ClCG01G013460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G013460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTranscription termination factor 4
Genome locationCG_Chr01:26639427..26644079
RNA-Seq ExpressionClCG01G013460
SyntenyClCG01G013460
Gene Ontology termsGO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR026182 - Anaphase-promoting complex subunit 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]8.8e-4296.91Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]3.6e-43100Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]6.5e-3789.8Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQP +EELLLAMEESDFEEKCNEIRKTNSNLVVIGK T DNDKED   +A+DDDADNAEESE EEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET
XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]1.5e-4197.92Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKM+ADNDKEDIEAEDDDADN EESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET
XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]8.8e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKM ADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
TrEMBL top hitse value%identityAlignment
A0A0A0LWF0 Uncharacterized protein4.2e-4296.91Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A1S3AXA5 uncharacterized protein LOC1034837971.7e-43100Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A5A7UJS1 Transcription termination factor 41.7e-43100Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A6J1GSM6 uncharacterized protein LOC1114567621.7e-43100Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A6J1JWJ6 uncharacterized protein LOC1114903241.7e-43100Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63135.1 unknown protein5.7e-3172.73Show/hide
Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG
        MLQFP  MTQ+P ST+TIP S+LLP QWPQPQNEE+LLAMEE++FEEKCNEIRK +  L VIGK   +N++E  D EAEDDDADNAEES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCACCCCCTAGTGAGGTTCGGAGGAACTGTCTCCCATTCTCTTTCGAAAAATAAGGCGGCTCATCTCGCTCAACTGCTTACTGCTCGAGAGCGCAAGAGTGCTCC
TTGCTCGAATTCACAGGCTAGGGCTCATCTACTACGATATTACAGAATCAGTGGTCTTCAAGCCTACTGTGTACGATTAACCAGTCTTGCGGCAGCAAAAGGATTAGATG
TCCCCCATGCTACGGTTCCTTGCGTGGGAATTGGGGTTAAAACAGAGCAGGGTCAAACCTCGACCGCAATAGGAACAGAAATAAACCAGTTGCCAAACACCAGACATTTT
CGAATTCCGCAACGGAGCGAGCTCATTCGTCTCTCTCTCTCTCTCCAGTTTCCAGCTCCGGCGACAAAAATGCTGCAGTTTCCGGCTTTCATGACACAGTACCCTTGGTC
TACAAGGACAATTCCCACGTCGTTTTTACTGCCGTCTCAGTGGCCACAACCCCAAAACGAAGAGCTACTGCTCGCCATGGAAGAGTCTGATTTTGAAGAAAAGTGCAATG
AAATTAGGAAGACAAACAGCAACCTGGTTGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCC
GAGGCTGAAGAATTCGAGCAGGAAACTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCACCCCCTAGTGAGGTTCGGAGGAACTGTCTCCCATTCTCTTTCGAAAAATAAGGCGGCTCATCTCGCTCAACTGCTTACTGCTCGAGAGCGCAAGAGTGCTCC
TTGCTCGAATTCACAGGCTAGGGCTCATCTACTACGATATTACAGAATCAGTGGTCTTCAAGCCTACTGTGTACGATTAACCAGTCTTGCGGCAGCAAAAGGATTAGATG
TCCCCCATGCTACGGTTCCTTGCGTGGGAATTGGGGTTAAAACAGAGCAGGGTCAAACCTCGACCGCAATAGGAACAGAAATAAACCAGTTGCCAAACACCAGACATTTT
CGAATTCCGCAACGGAGCGAGCTCATTCGTCTCTCTCTCTCTCTCCAGTTTCCAGCTCCGGCGACAAAAATGCTGCAGTTTCCGGCTTTCATGACACAGTACCCTTGGTC
TACAAGGACAATTCCCACGTCGTTTTTACTGCCGTCTCAGTGGCCACAACCCCAAAACGAAGAGCTACTGCTCGCCATGGAAGAGTCTGATTTTGAAGAAAAGTGCAATG
AAATTAGGAAGACAAACAGCAACCTGGTTGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCC
GAGGCTGAAGAATTCGAGCAGGAAACTGGTTAATATGCATCTTTATTTCCTTTCCTGTCTTTACTCTTCAGAATCCTCAATTTACTAGTTTTTTTCTGTTTGTTAACTAC
CTTATAGCTTCAAATTTATGTGCCTCTTGAGCCGATGTTTCTTTCTTACTTTGTGTTAAAAGTTATTGTTATTGTATTTTCCACTCCATTTGCTTTTAACCAATTGAAAA
TCTTCC
Protein sequenceShow/hide protein sequence
MSHPLVRFGGTVSHSLSKNKAAHLAQLLTARERKSAPCSNSQARAHLLRYYRISGLQAYCVRLTSLAAAKGLDVPHATVPCVGIGVKTEQGQTSTAIGTEINQLPNTRHF
RIPQRSELIRLSLSLQFPAPATKMLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEES
EAEEFEQETG