; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G013610 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G013610
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMuDRA-like transposase
Genome locationCG_Chr01:26908350..26909554
RNA-Seq ExpressionClCG01G013610
SyntenyClCG01G013610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068206.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.5e-1137.07Show/hide
Query:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM
        G VH S      K    V    SS+   ++VGQI F K D+ M L +LA+K+NF+            VRC    C W +R  +++  +IFKI KY  V+ 
Subjt:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM

Query:  CFIEVLNHDHRQASAF
        C ++ LN DHRQA ++
Subjt:  CFIEVLNHDHRQASAF

XP_038889297.1 uncharacterized protein LOC120079207 [Benincasa hispida]1.2e-1038.46Show/hide
Query:  MQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF--
        M   S S  +V++G I  SK D++M L +LAI+ NF+            V C  E C+W +R  K++ C+IFKI KY  V+ C  E+L +DHRQAS++  
Subjt:  MQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF--

Query:  --KPRSPMFMCSCSWHP
             S     SCS+ P
Subjt:  --KPRSPMFMCSCSWHP

XP_038902318.1 uncharacterized protein LOC120088954 [Benincasa hispida]1.2e-1341.74Show/hide
Query:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM
        G +++   C   + G  +M   SSS T+VEVGQI  SK D++M L +L I  NFE           TV+C  + C+W +   K+  CDIFKI K+   + 
Subjt:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM

Query:  CFIEVLNHDHRQASA
        C I +LNHDHRQA+A
Subjt:  CFIEVLNHDHRQASA

XP_038902336.1 uncharacterized protein LOC120088970 [Benincasa hispida]1.9e-1648Show/hide
Query:  GPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQAS
        G  +M   SSS T+VEV QI  SK D++M L +L I  NFE           TV+C  + C+W++R  K+ GCDIFKI+KY   + CFI +LNHDHRQA+
Subjt:  GPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQAS

XP_038905828.1 uncharacterized protein LOC120091780 [Benincasa hispida]5.9e-1344.44Show/hide
Query:  VMQPHSSSG-TNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASA
        +M   SS G  +VEVGQ+  SK +++M L +L+I +NFE           T++C  + C+W++R  KMEG DIFKI KY + + C I +LNHDHRQ +A
Subjt:  VMQPHSSSG-TNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASA

TrEMBL top hitse value%identityAlignment
A0A2I7YUI4 MuDRA-like transposase1.7e-1041.49Show/hide
Query:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF
        SS+    +VGQI FSK D+ M L +LA+K+NF+            VRC    C W +R  +++  +IFKI KY  V+ C ++VLN DHRQA ++
Subjt:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF

A0A5A7VNP6 MuDRA-like transposase2.7e-1137.07Show/hide
Query:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM
        G VH S      K    V    SS+   ++VGQI F K D+ M L +LA+K+NF+            VRC    C W +R  +++  +IFKI KY  V+ 
Subjt:  GNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYM

Query:  CFIEVLNHDHRQASAF
        C ++ LN DHRQA ++
Subjt:  CFIEVLNHDHRQASAF

A0A6J1DPC2 uncharacterized protein LOC111022579 isoform X23.8e-1039.36Show/hide
Query:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF
        SS+    +VGQI F K D+ M L ++A+K NFE            + C  E C+W +R  K+ G DIF+I KY  V+ C ++++N  HRQA A+
Subjt:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF

A0A6J1DRN0 uncharacterized protein LOC111022579 isoform X13.8e-1039.36Show/hide
Query:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF
        SS+    +VGQI F K D+ M L ++A+K NFE            + C  E C+W +R  K+ G DIF+I KY  V+ C ++++N  HRQA A+
Subjt:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF

A0A6N0C346 MURA transposase1.7e-1041.49Show/hide
Query:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF
        SS+    +VGQI FSK D+ M L +LA+K+NF+            VRC    C W +R  +++  +IFKI KY  V+ C ++VLN DHRQA ++
Subjt:  SSSGTNVEVGQISFSKDDMQMMLLLLAIKENFE-----------TVRCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATACCAATCCATGGGATGAGACATGTAGTACACAACAACATTCTGGTCGATAGAGGGTTCATAATTCTAAAGTGGATGGACCCACAGACAATGTTGTTAATTGG
AATGGTGGAGAAACTCCAATTTCTGCACAATGAGTTTGGTTATCTCGTTGGAAATGTGCATACATCTGTTGGTTGTGGTACTTTCAAAGTTGGACCTTTTGTTATGCAGC
CACATTCCTCGTCTGGTACGAATGTAGAGGTAGGGCAAATCTCTTTCTCAAAGGATGATATGCAAATGATGTTGTTGTTGCTAGCTATCAAGGAGAATTTTGAGACTGTG
AGGTGTAACCACGAGATGTGTGAATGGGCTGTACGAGTGACGAAGATGGAAGGATGTGACATATTCAAGATTATAAAATATACGACTGTCTACATGTGCTTTATTGAAGT
TTTGAACCACGATCACCGTCAAGCAAGTGCATTTAAACCACGATCACCGATGTTCATGTGCTCATGTAGTTGGCATCCTGGTGCTCATGCTGTTGAAGACATTTGTGTGT
TCATGCAGTCGGCGTTTGGGTGCTTGTGTAATGGAGGAGGTGCAGTTGACTTCTTGGTTTCAAAAGGGAAAGCGGGAGAACTAATTAGGCCGACAAGTTTGGTGGGTCGT
GCTGAGAAACCACGATCACCGATGTTCATGTGCTCATGTAGTTGGCATCCTGGTGCTCATGCTGTTGAAGACATTTGTGTGTTCATGCAGTCGGCGTTTGGGTGCTTGTG
TAGTCGCCAACGTTTGTTTGCTCGTGTTGTCGTCGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAATACCAATCCATGGGATGAGACATGTAGTACACAACAACATTCTGGTCGATAGAGGGTTCATAATTCTAAAGTGGATGGACCCACAGACAATGTTGTTAATTGG
AATGGTGGAGAAACTCCAATTTCTGCACAATGAGTTTGGTTATCTCGTTGGAAATGTGCATACATCTGTTGGTTGTGGTACTTTCAAAGTTGGACCTTTTGTTATGCAGC
CACATTCCTCGTCTGGTACGAATGTAGAGGTAGGGCAAATCTCTTTCTCAAAGGATGATATGCAAATGATGTTGTTGTTGCTAGCTATCAAGGAGAATTTTGAGACTGTG
AGGTGTAACCACGAGATGTGTGAATGGGCTGTACGAGTGACGAAGATGGAAGGATGTGACATATTCAAGATTATAAAATATACGACTGTCTACATGTGCTTTATTGAAGT
TTTGAACCACGATCACCGTCAAGCAAGTGCATTTAAACCACGATCACCGATGTTCATGTGCTCATGTAGTTGGCATCCTGGTGCTCATGCTGTTGAAGACATTTGTGTGT
TCATGCAGTCGGCGTTTGGGTGCTTGTGTAATGGAGGAGGTGCAGTTGACTTCTTGGTTTCAAAAGGGAAAGCGGGAGAACTAATTAGGCCGACAAGTTTGGTGGGTCGT
GCTGAGAAACCACGATCACCGATGTTCATGTGCTCATGTAGTTGGCATCCTGGTGCTCATGCTGTTGAAGACATTTGTGTGTTCATGCAGTCGGCGTTTGGGTGCTTGTG
TAGTCGCCAACGTTTGTTTGCTCGTGTTGTCGTCGGTTAG
Protein sequenceShow/hide protein sequence
MTIPIHGMRHVVHNNILVDRGFIILKWMDPQTMLLIGMVEKLQFLHNEFGYLVGNVHTSVGCGTFKVGPFVMQPHSSSGTNVEVGQISFSKDDMQMMLLLLAIKENFETV
RCNHEMCEWAVRVTKMEGCDIFKIIKYTTVYMCFIEVLNHDHRQASAFKPRSPMFMCSCSWHPGAHAVEDICVFMQSAFGCLCNGGGAVDFLVSKGKAGELIRPTSLVGR
AEKPRSPMFMCSCSWHPGAHAVEDICVFMQSAFGCLCSRQRLFARVVVG