CuGenDBv2

Gene ID	ClCG01G013630
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Cytochrome f
Genome location	CG_Chr01:26998724..26999529
RNA-Seq Expression	ClCG01G013630
Synteny	ClCG01G013630
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0031361 - integral component of thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR002325 - Cytochrome f IPR011054 - Rudiment single hybrid motif IPR036826 - Cytochrome f large domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF9825355.1 hypothetical protein H0E87_005077 [Populus deltoides]

1.0e-33

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

YP_004841796.1 cytochrome f [Cucumis melo subsp. melo]

1.0e-33

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

YP_009326002.1 cytochrome f [Citrullus lanatus]

1.0e-33

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

YP_009752003.1 cytochrome f [Cionosicys macranthus]

1.0e-33

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

YP_010131107.1 cytochrome f [Benincasa hispida]

1.0e-33

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE85 Cytochrome f

5.0e-34

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

A0A1S4EU17 Cytochrome f

5.0e-34

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

A0A1X9Q151 Cytochrome f

5.0e-34

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

A0A218KG41 Cytochrome f

5.0e-34

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

A0A249RZB7 Cytochrome f

5.0e-34

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

SwissProt top hits

e value

%identity

Alignment

B1A948 Cytochrome f

7.5e-35

68.1

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D AT KD HFLKYPIYVGG RGR                    GI SKI+RKEKGGYE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

Q09X04 Cytochrome f

8.8e-36

64.62

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISLSSTFSTFESLVILA
        NPNVGGFGQGDAEI L         L+ LA
Subjt:  NPNVGGFGQGDAEISLSSTFSTFESLVILA

Q0ZJ07 Cytochrome f

4.4e-35

63.7

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TI DA++GRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISLSSTFST-----FESLVILA
        NPNVGGFGQGDAEI L           F S VILA
Subjt:  NPNVGGFGQGDAEISLSSTFST-----FESLVILA

Q1KXU6 Cytochrome f

9.8e-35

62.22

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKI+RKEKGGYE TI DA++GRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISLSSTFST-----FESLVILA
        NPNVGGFGQGDAEI L           F + VILA
Subjt:  NPNVGGFGQGDAEISLSSTFST-----FESLVILA

Q2QD76 Cytochrome f

1.4e-36

71.55

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Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGGYE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00540.1 photosynthetic electron transfer A

9.1e-36

67.24

Show/hide

Query:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS
        I+  D AT KD HFLKYPIYVGG RGR                    GI SKI+RKEKGGYE TIVDA+NGR+V+D+IP  LELLVS+GESIKLDQPLTS
Subjt:  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTS

Query:  NPNVGGFGQGDAEISL
        NPNVGGFGQGDAEI L
Subjt:  NPNVGGFGQGDAEISL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAATCTGAGTTTATAGCTTTAGACAAGGCTGGAGAAGAAGCAGAATGGCTTCAAAAAATTTTGGAAGATATTCCAAACTGGTCTAAGCTTGTGCCTGCAATATGTAT
ACATAATGATAGGCAAGCAGCTATTGGAAGGGCACAAAATATTATGTATAATGACCTTGCAACTAAGAAAGATGATCACTTCTTAAAATATCCCATATACGTAGGCGGGA
AAAGGGGAAGGGGTATAGCAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAACAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATCTTATCCCTCCA
AGACTAGAACTTCTTGTTTCAAAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGAGATGCGGAAATAAGCCTTTC
ATCGACATTTTCAACATTTGAGTCCCTTGTGATCTTAGCATAG

mRNA sequence

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Protein sequence

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MESEFIALDKAGEEAEWLQKILEDIPNWSKLVPAICIHNDRQAAIGRAQNIMYNDLATKKDDHFLKYPIYVGGKRGRGIASKIIRKEKGGYETTIVDAANGRQVVDLIPP
RLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTFSTFESLVILA

ClCG01G013630 (gene) of Watermelon (Charleston Gray) v2.5 genome