; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G014080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G014080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGibberellin-regulated protein 2
Genome locationCG_Chr01:28324224..28326215
RNA-Seq ExpressionClCG01G014080
SyntenyClCG01G014080
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]1.2e-3689.16Show/hide
Query:  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGNKTKCP
Subjt:  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]2.5e-5086.09Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT
        MAVR FLLLLLLGVFVFLCLSQVSSNGY  E  +EMEYDEK+MRG NRRLMQ I+CGG+C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGT
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT

Query:  CYTGMTTHGNKTKCP
        CYT MTTHGN+TKCP
Subjt:  CYTGMTTHGNKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]5.8e-4779.37Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPP
        MAVR FLLLLLLGVFVFLCLS        Q+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPP
Subjt:  MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPP

Query:  GTSGNREMCGTCYTGMTTHGNKTKCP
        GTSGNREMCGTCYT MTTHGNKTKCP
Subjt:  GTSGNREMCGTCYTGMTTHGNKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]3.7e-4984.75Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREM
        MAVR FLLLLLLGVFVFLCLSQ+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREM
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREM

Query:  CGTCYTGMTTHGNKTKCP
        CGTCYT MTTHGNKTKCP
Subjt:  CGTCYTGMTTHGNKTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]5.1e-5189.57Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT
        MAVRNFLLLLLLG+FV L LSQVSS+GYP E   EMEYDEKVMRGTNRRLMQNINCG ECKRRCGAHSRPNRCIRACGTCC+RCKCVP GTSGNREMCGT
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT

Query:  CYTGMTTHGNKTKCP
        CYT MTTHGNKTKCP
Subjt:  CYTGMTTHGNKTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein1.2e-5086.09Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT
        MAVR FLLLLLLGVFVFLCLSQVSSNGY  E  +EMEYDEK+MRG NRRLMQ I+CGG+C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGT
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGT

Query:  CYTGMTTHGNKTKCP
        CYT MTTHGN+TKCP
Subjt:  CYTGMTTHGNKTKCP

A0A1S3AVJ9 snakin-2-like isoform X21.8e-4984.75Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREM
        MAVR FLLLLLLGVFVFLCLSQ+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREM
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREM

Query:  CGTCYTGMTTHGNKTKCP
        CGTCYT MTTHGNKTKCP
Subjt:  CGTCYTGMTTHGNKTKCP

A0A1S3AW57 snakin-2-like isoform X12.8e-4779.37Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPP
        MAVR FLLLLLLGVFVFLCLS        Q+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPP
Subjt:  MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPP

Query:  GTSGNREMCGTCYTGMTTHGNKTKCP
        GTSGNREMCGTCYT MTTHGNKTKCP
Subjt:  GTSGNREMCGTCYTGMTTHGNKTKCP

A0A5A7UP17 Snakin-2-like isoform X15.9e-3789.16Show/hide
Query:  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGNKTKCP
Subjt:  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

A0A6J1CAF9 snakin-2-like1.5e-3570.18Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC
        MAV  F  LLLLGV VFLCLS+V   G      ++E   + +RG NRRLM+ I+CGG CKRRCGAHSRP  CIRACGTCCARC+CVPPGTSGNRE+CG C
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC

Query:  YTGMTTHGNKTKCP
        YTGMTTH NKTKCP
Subjt:  YTGMTTHGNKTKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.5e-1661.29Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY  +TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

P46687 Gibberellin-regulated protein 38.6e-1742.11Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC
        MA+    L+LLL   +  CL+    + +  E+ ++   E V++         I+CGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  C
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC

Query:  YTGMTTHGNKTKCP
        Y  +TT G + KCP
Subjt:  YTGMTTHGNKTKCP

P46688 Gibberellin-regulated protein 26.6e-1759.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY  +TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

Q93X17 Snakin-22.0e-1850.93Show/hide
Query:  LLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTT
        L LLLL     +   QV+SN       E  Y  K            I+CGG C  RC   SRP  C RACGTCCARC CVPPGTSGN E C  CY  +TT
Subjt:  LLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTT

Query:  HGNKTKCP
        HGNK KCP
Subjt:  HGNKTKCP

Q9LFR3 Gibberellin-regulated protein 145.9e-1864.52Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY  M T G K+KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein3.9e-1740.17Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQN---INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMC
        M V  F+ L++  + +   L+++SS+         + +++      +R   +   INCG  C RRC   SR   C RACG+CCA+C+CVPPGTSGN   C
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQN---INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMC

Query:  GTCYTGMTTHGNKTKCP
          CY  + THGNK KCP
Subjt:  GTCYTGMTTHGNKTKCP

AT2G18420.1 Gibberellin-regulated family protein1.0e-1761.29Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY  +TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

AT4G09600.1 GAST1 protein homolog 36.1e-1842.11Show/hide
Query:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC
        MA+    L+LLL   +  CL+    + +  E+ ++   E V++         I+CGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  C
Subjt:  MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTC

Query:  YTGMTTHGNKTKCP
        Y  +TT G + KCP
Subjt:  YTGMTTHGNKTKCP

AT4G09610.1 GAST1 protein homolog 24.7e-1859.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY  +TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

AT5G14920.1 Gibberellin-regulated family protein4.2e-1964.52Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP
        I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY  M T G K+KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCGTAATTTCCTCCTCCTCCTTCTTCTTGGGGTTTTCGTCTTCCTCTGCCTTTCACAGGTGTCTTCTAACGGATACCCAAGAGAAGAAGAAGAGATGGAATA
TGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTAATGCAAAACATAAATTGTGGAGGGGAATGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAA
GAGCGTGCGGGACCTGCTGCGCACGGTGCAAATGTGTGCCGCCAGGAACCTCCGGCAACCGTGAAATGTGCGGCACCTGCTACACCGGCATGACCACACATGGCAACAAA
ACCAAGTGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
GAAAGGCATGGCGGTTCGTAATTTCCTCCTCCTCCTTCTTCTTGGGGTTTTCGTCTTCCTCTGCCTTTCACAGGTGTCTTCTAACGGATACCCAAGAGAAGAAGAAGAGA
TGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTAATGCAAAACATAAATTGTGGAGGGGAATGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGG
TGCATAAGAGCGTGCGGGACCTGCTGCGCACGGTGCAAATGTGTGCCGCCAGGAACCTCCGGCAACCGTGAAATGTGCGGCACCTGCTACACCGGCATGACCACACATGG
CAACAAAACCAAGTGCCCTTAGTTAACTTCCGATTCGGGTGCATCTTGATTATATCTATCTTTTTGCACTTTATTCCGTTGCTCAATTATAGTTTGTGACGTATTTTCTT
AAATAATTTTGACTTTTCTTTATCGTTTTTGTAGTGGGTTGCAAAAAGATAATAGAGTCCAATTTGAATTTAATTTTTGTTTTATATTTTCAT
Protein sequenceShow/hide protein sequence
MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNK
TKCP