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ClCG01G014970 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G014970
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRegulatory particle non-ATPase 10
Genome locationCG_Chr01:29271307..29271714
RNA-Seq ExpressionClCG01G014970
SyntenyClCG01G014970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER41841.1 hypothetical protein STAS_18573 [Striga asiatica]1.2e-2254.81Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MVAAGDEGTD   D   + D + DGA GLVL +  AVV  D + V  EER PDVE++VALV   + G   DLL  V GV  EAVVVDAD  V V GG   
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
           GGD V GGD+E EDGGVL+DE GL  L++ P+
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

GER45898.1 regulatory particle non-ATPase 10 [Striga asiatica]8.8e-2656.3Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        +V+AGDEG D   DA ++FD + DGA GLVL +  AVV  D + V  +E  PDVEI+VALV   + G  SDLLV V   D EAVVVD D  VRV  GDGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        L+ GGD V GGD+EDEDGGVL+DE G   L++ P+
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

KAA8518468.1 hypothetical protein F0562_015942 [Nyssa sinensis]9.1e-2352.24Show/hide
Query:  VAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGDL
        V A  E ++  S  +I+ D Q DG  GLVL +  AVVRR  +  + +E RP+V++ VALV R   G   DLLV V  VDVE VVVDADLVVRVP  DGDL
Subjt:  VAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGDL

Query:  DTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        D GG+ + GGD+E EDGGVL DE     L++ P+
Subjt:  DTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]1.1e-2554.81Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MV  GDEG DL  D  +  D Q +    LVL QS  VVR D +    +ERRPDV+++VALV R ++  E DLL  V  VDVE VVVDADLVVRV GGDGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        L+ GG+ V GG +E EDG VL+DE GL  L++ P+
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

TYK04331.1 hypothetical protein E5676_scaffold21333G00010 [Cucumis melo var. makuwa]8.7e-5080.74Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MV AGDEGTDLESDAT+EF+ QLD  +GL+LI+ GAVV  D NGVTDEE RPDVEIVVALVGRLN GTESDLLV VNGVDVEAVV+D+DLVV V G DGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        LDTGGD+VS GDIE+ DGGVLDDEFGLCRLKN PN
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

TrEMBL top hitse value%identityAlignment
A0A0A0KKM0 Uncharacterized protein3.6e-4979.26Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MVAAGDEGTD ESDA +EF+ QLDG +GL+LI+ GAVV RD N VTDEE RPDV+IVVALVG LN GTESDLLV VNGVDVEAVV+D+DLVVRV G DGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        LDTGGD+VSGG+IE+ DGGVLDDEFGLC LKN PN
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

A0A498HYB9 Uncharacterized protein5.6e-2654.81Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MV  GDEG DL  D  +  D Q +    LVL QS  VVR D +    +ERRPDV+++VALV R ++  E DLL  V  VDVE VVVDADLVVRV GGDGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        L+ GG+ V GG +E EDG VL+DE GL  L++ P+
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

A0A5A7QLV4 Regulatory particle non-ATPase 104.3e-2656.3Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        +V+AGDEG D   DA ++FD + DGA GLVL +  AVV  D + V  +E  PDVEI+VALV   + G  SDLLV V   D EAVVVD D  VRV  GDGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        L+ GGD V GGD+EDEDGGVL+DE G   L++ P+
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

A0A5D3BXB8 Uncharacterized protein4.2e-5080.74Show/hide
Query:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD
        MV AGDEGTDLESDAT+EF+ QLD  +GL+LI+ GAVV  D NGVTDEE RPDVEIVVALVGRLN GTESDLLV VNGVDVEAVV+D+DLVV V G DGD
Subjt:  MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGD

Query:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        LDTGGD+VS GDIE+ DGGVLDDEFGLCRLKN PN
Subjt:  LDTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

A0A5J4ZLG7 Uncharacterized protein4.4e-2352.24Show/hide
Query:  VAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGDL
        V A  E ++  S  +I+ D Q DG  GLVL +  AVVRR  +  + +E RP+V++ VALV R   G   DLLV V  VDVE VVVDADLVVRVP  DGDL
Subjt:  VAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGDL

Query:  DTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN
        D GG+ + GGD+E EDGGVL DE     L++ P+
Subjt:  DTGGDKVSGGDIEDEDGGVLDDEFGLCRLKNRPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCGGCCGGAGATGAAGGTACCGACCTTGAATCGGACGCGACCATCGAGTTTGATCGACAACTGGACGGTGCCGACGGCCTGGTCCTGATTCAGAGCGGC
GCCGTTGTACGGAGAGATTGGAACGGCGTTACCGACGAGGAACGGAGACCAGATGTTGAGATCGTTGTGGCCTTGGTAGGTAGGTTGAATGACGGTACGGAGAGT
GATCTGTTGGTTCCGGTAAACGGCGTAGACGTCGAGGCGGTCGTAGTAGATGCCGATCTTGTCGTTAGGGTTCCGGGAGGAGACGGTGACTTGGATACTGGAGGA
GATAAAGTTAGCGGCGGTGACATTGAAGATGAAGACGGTGGCGTCTTGGATGATGAATTTGGGCTTTGTAGGCTGAAGAATCGCCCAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCGGCCGGAGATGAAGGTACCGACCTTGAATCGGACGCGACCATCGAGTTTGATCGACAACTGGACGGTGCCGACGGCCTGGTCCTGATTCAGAGCGGC
GCCGTTGTACGGAGAGATTGGAACGGCGTTACCGACGAGGAACGGAGACCAGATGTTGAGATCGTTGTGGCCTTGGTAGGTAGGTTGAATGACGGTACGGAGAGT
GATCTGTTGGTTCCGGTAAACGGCGTAGACGTCGAGGCGGTCGTAGTAGATGCCGATCTTGTCGTTAGGGTTCCGGGAGGAGACGGTGACTTGGATACTGGAGGA
GATAAAGTTAGCGGCGGTGACATTGAAGATGAAGACGGTGGCGTCTTGGATGATGAATTTGGGCTTTGTAGGCTGAAGAATCGCCCAAATTAG
Protein sequenceShow/hide protein sequence
MVAAGDEGTDLESDATIEFDRQLDGADGLVLIQSGAVVRRDWNGVTDEERRPDVEIVVALVGRLNDGTESDLLVPVNGVDVEAVVVDADLVVRVPGGDGDLDTGG
DKVSGGDIEDEDGGVLDDEFGLCRLKNRPN