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ClCG01G016030 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G016030
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionHeat shock protein 40
Genome locationCG_Chr01:30348732..30348977
RNA-Seq ExpressionClCG01G016030
SyntenyClCG01G016030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647478.1 hypothetical protein Csa_003673 [Cucumis sativus]8.2e-1960.49Show/hide
Query:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS
        M+KKN+D+K+  IV+R GET++K+T  WSPAMDNIV++S K  L EA+D++D+KID +LYSS+ +T+RLPIF+EICP +SS
Subjt:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS

KAG6604244.1 hypothetical protein SDJN03_04853, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1157.89Show/hide
Query:  SDEKRNSIVVRYGETRRKATPYWSPAMDNIVQV-SYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        + +KR  IVV  GET  K T  WSP MD+IVQ+ S  K L + +D+IDSKIDRVLYSS   RRLPIF+E+CP  S+
Subjt:  SDEKRNSIVVRYGETRRKATPYWSPAMDNIVQV-SYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS

TYK12969.1 heat shock protein 40 [Cucumis melo var. makuwa]4.3e-2062.5Show/hide
Query:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        M+KKN+D+K+  IV+R GETR+K+T  WSPAMDNIV++S K  L +A+D++DSKID +LYS  KT+RLPIF+EICP +SS
Subjt:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS

TrEMBL top hitse value%identityAlignment
A0A0A0KKZ2 Uncharacterized protein4.0e-1960.49Show/hide
Query:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS
        M+KKN+D+K+  IV+R GET++K+T  WSPAMDNIV++S K  L EA+D++D+KID +LYSS+ +T+RLPIF+EICP +SS
Subjt:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS

A0A5D3CRK5 Heat shock protein 402.1e-2062.5Show/hide
Query:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        M+KKN+D+K+  IV+R GETR+K+T  WSPAMDNIV++S K  L +A+D++DSKID +LYS  KT+RLPIF+EICP +SS
Subjt:  MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAAAAACAGCGACGAGAAAAGAAATTCGATTGTGGTTAGGTATGGGGAAACAAGAAGAAAGGCAACGCCGTATTGGTCGCCGGCGATGGATAATATAGTGCA
AGTTTCTTACAAGAAGCTATTGATTGAAGCAATGGATCAAATCGATTCGAAAATCGATCGTGTTCTTTATTCTTCCAACAAGACCAGGAGATTACCAATTTTTGATGAGA
TTTGTCCATTTTATTCCTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAAAAACAGCGACGAGAAAAGAAATTCGATTGTGGTTAGGTATGGGGAAACAAGAAGAAAGGCAACGCCGTATTGGTCGCCGGCGATGGATAATATAGTGCA
AGTTTCTTACAAGAAGCTATTGATTGAAGCAATGGATCAAATCGATTCGAAAATCGATCGTGTTCTTTATTCTTCCAACAAGACCAGGAGATTACCAATTTTTGATGAGA
TTTGTCCATTTTATTCCTCTTTGTGA
Protein sequenceShow/hide protein sequence
MDKKNSDEKRNSIVVRYGETRRKATPYWSPAMDNIVQVSYKKLLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSSL