; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G017590 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G017590
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60S ribosomal protein L26
Genome locationCG_Chr01:32113222..32114607
RNA-Seq ExpressionClCG01G017590
SyntenyClCG01G017590
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141862.1 60S ribosomal protein L26-1 [Cucumis sativus]1.3e-6998.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]9.0e-6896.53Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]1.8e-6897.22Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]4.0e-6897.22Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

XP_038880918.1 60S ribosomal protein L26-1 [Benincasa hispida]6.2e-6997.92Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMSAPLS+DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

TrEMBL top hitse value%identityAlignment
A0A0A0KGI0 KOW domain-containing protein6.1e-7098.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

A0A1S3B106 60S ribosomal protein L26-16.1e-7098.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

A0A5D3CR35 Ribosomal protein L26/L24P, eukaryotic/archaeal6.1e-7098.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

A0A6J1GH60 60S ribosomal protein L26-18.7e-6997.22Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

A0A6J1INB1 60S ribosomal protein L26-18.7e-6997.22Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQ+
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L261.9e-4468.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-11.0e-6689.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQN
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

P61257 60S ribosomal protein L264.2e-4468.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.3e-6183.33Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR++RK HF+A SS RRV MS+PLSTDLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKFTA D+MQN
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

Q9FJX2 60S ribosomal protein L26-22.4e-6384.72Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M+N
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein7.3e-6889.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQN
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN

AT5G67510.1 Translation protein SH3-like family protein1.7e-6484.72Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M+N
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCCCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGACTGA
CCTCCGGTCAAAGTACAACGTACGATCTATGCCGATTCGCAAGGATGATGAGGTTCAAGTCGTCCGTGGAACTTACAAGGGTCGGGAGGGCAAGGTAGTGCAGGTGTATC
GCAGGAAGTGGGTTATCCACATCGAGCGTATCACTCGGGAAAAGGTTAACGGTTCAACTGTTAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGCTG
GACAAGGACCGGAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCTGACAAGGACAAGGGAACCAAGTTCACCGCAGAGGATATCATGCAGAACGAATCTTG
GAACGATCCTCTGCCATTCTTGCTTCTAGTGCTGGTTGTTTCTGTAGCGGACGTCCAGTTGCATTGGTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCCCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGACTGA
CCTCCGGTCAAAGTACAACGTACGATCTATGCCGATTCGCAAGGATGATGAGGTTCAAGTCGTCCGTGGAACTTACAAGGGTCGGGAGGGCAAGGTAGTGCAGGTGTATC
GCAGGAAGTGGGTTATCCACATCGAGCGTATCACTCGGGAAAAGGTTAACGGTTCAACTGTTAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGCTG
GACAAGGACCGGAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCTGACAAGGACAAGGGAACCAAGTTCACCGCAGAGGATATCATGCAGAACGAATCTTG
GAACGATCCTCTGCCATTCTTGCTTCTAGTGCTGGTTGTTTCTGTAGCGGACGTCCAGTTGCATTGGTCGTAG
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIKPSKVVITKLRL
DKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQNESWNDPLPFLLLVLVVSVADVQLHWS