; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G017680 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G017680
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:32183177..32184442
RNA-Seq ExpressionClCG01G017680
SyntenyClCG01G017680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594968.1 hypothetical protein SDJN03_11521, partial [Cucurbita argyrosperma subsp. sororia]9.1e-0750Show/hide
Query:  LHHITSFSLTSKLSLLVGASNIANSSTGLCPLRFCPL-----TFSFLFPFCCWRGRGL-ASNPLYSSGLLPILGNGYI
        L HI SFSL  KLSLLVG SNI + +    P  F  L     +F   FP CCWRG G  +S  LYS+ LLPIL +G +
Subjt:  LHHITSFSLTSKLSLLVGASNIANSSTGLCPLRFCPL-----TFSFLFPFCCWRGRGL-ASNPLYSSGLLPILGNGYI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAAGTCAAATTTTAATACGAAGCCAAATCGCATCTTCGCATCTCGCCAACGAATCTTTCTCTTTTTCTTCGTTGCATTGCATCATATAACTTCCTTTTCGTTAAC
ATCTAAGCTTTCTCTCCTCGTGGGGGCCTCCAACATTGCCAATTCATCCACCGGACTCTGCCCCCTTCGATTCTGTCCGCTAACTTTCTCTTTTTTGTTCCCTTTCTGCT
GCTGGAGGGGACGAGGGCTTGCTTCTAACCCTCTCTATTCTTCTGGCCTTCTTCCAATTTTAGGGAATGGATACATACGAGGAAATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACAAGTCAAATTTTAATACGAAGCCAAATCGCATCTTCGCATCTCGCCAACGAATCTTTCTCTTTTTCTTCGTTGCATTGCATCATATAACTTCCTTTTCGTTAAC
ATCTAAGCTTTCTCTCCTCGTGGGGGCCTCCAACATTGCCAATTCATCCACCGGACTCTGCCCCCTTCGATTCTGTCCGCTAACTTTCTCTTTTTTGTTCCCTTTCTGCT
GCTGGAGGGGACGAGGGCTTGCTTCTAACCCTCTCTATTCTTCTGGCCTTCTTCCAATTTTAGGGAATGGATACATACGAGGAAATGACTGA
Protein sequenceShow/hide protein sequence
MYKSNFNTKPNRIFASRQRIFLFFFVALHHITSFSLTSKLSLLVGASNIANSSTGLCPLRFCPLTFSFLFPFCCWRGRGLASNPLYSSGLLPILGNGYIRGND